STRINGSTRING
RBM4 RBM4 MOV10L1 MOV10L1 AJUBA AJUBA TNRC6A TNRC6A CLP1 CLP1 AGO2 AGO2 ZFP36 ZFP36 DDX6 DDX6 XPO5 XPO5 PUM1 PUM1 DHX9 DHX9 CNOT1 CNOT1 MOV10 MOV10 ELAVL1 ELAVL1 MARF1 MARF1 EIF4ENIF1 EIF4ENIF1 ZAR1L ZAR1L TNRC6C TNRC6C GIGYF2 GIGYF2 EIF4G1 EIF4G1 TNRC6B TNRC6B WTIP WTIP DICER1 DICER1 LIMD1 LIMD1 TARBP2 TARBP2 EIF6 EIF6 TRIM71 TRIM71 HELZ HELZ AGO3 AGO3 AGO1 AGO1 AGO4 AGO4 NRDE2 NRDE2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RBM4RNA-binding protein 4 isoform X1. (363 aa)
MOV10L1Mov10 like RISC complex RNA helicase 1. (1188 aa)
AJUBALIM domain-containing protein ajuba. (537 aa)
TNRC6ATrinucleotide repeat-containing gene 6A protein isoform X9. (1955 aa)
CLP1Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...] (425 aa)
AGO2Argonaute RISC catalytic component 2. (852 aa)
ZFP36ZFP36 ring finger protein. (322 aa)
DDX6Probable ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family. (483 aa)
XPO5Exportin-5 isoform X1. (1204 aa)
PUM1Pumilio homolog 1 isoform X5. (1223 aa)
DHX9ATP-dependent RNA helicase A isoform X1. (1153 aa)
CNOT1CCR4-NOT transcription complex subunit 1 isoform X4. (2376 aa)
MOV10Putative helicase MOV-10. (997 aa)
ELAVL1ELAV-like protein 1. (326 aa)
MARF1Meiosis arrest female protein 1 isoform X2. (1742 aa)
EIF4ENIF1Eukaryotic translation initiation factor 4E transporter isoform X2. (980 aa)
ZAR1LZAR1-like protein. (323 aa)
TNRC6CTrinucleotide repeat-containing gene 6C protein isoform X3. (1736 aa)
GIGYF2PERQ amino acid-rich with GYF domain-containing protein 2 isoform X1. (1290 aa)
EIF4G1Eukaryotic translation initiation factor 4 gamma 1. (1537 aa)
TNRC6BTrinucleotide repeat-containing gene 6B protein isoform X8. (1756 aa)
WTIPWilms tumor protein 1-interacting protein. (292 aa)
DICER1Endoribonuclease Dicer; Belongs to the helicase family. Dicer subfamily. (1921 aa)
LIMD1LIM domain-containing protein 1 isoform X1. (654 aa)
TARBP2TARBP2 subunit of RISC loading complex. (366 aa)
EIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Behaves as a stimulatory translation initiation factor downstream insulin/growth factors. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export. Cytoplasmic release of TIF6 from 60S subunits and nuclear relocalization is promoted by a RACK1 (RACK1)- dependent protein kinase C activity. In tissues responsive to insulin, contro [...] (245 aa)
TRIM71E3 ubiquitin-protein ligase TRIM71. (613 aa)
HELZProbable helicase with zinc finger domain isoform X2. (1940 aa)
AGO3Protein argonaute-3; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs. (853 aa)
AGO1Protein argonaute-1 isoform X1; Belongs to the argonaute family. (854 aa)
AGO4Protein argonaute-4; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs. (854 aa)
NRDE2Protein NRDE2 homolog isoform X1. (1165 aa)
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin
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