(16 nodes) Stem cell division network (Tursiops truncatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSTTRP00000000710	annotation not available (306 aa)
	ZBTB16	Zinc finger and BTB domain-containing protein 16 isoform X1. (673 aa)
	WWTR1	WW domain-containing transcription regulator protein 1. (400 aa)
	STRA8	Stimulated by retinoic acid 8. (328 aa)
	ZFP36L2	mRNA decay activator protein ZFP36L2. (494 aa)
	BMI1	Polycomb complex protein BMI-1 isoform X2. (326 aa)
	ENSTTRP00000006381	annotation not available (382 aa)
	NOTCH1	Neurogenic locus notch homolog protein 1. (2527 aa)
	GNL3	Guanine nucleotide-binding protein-like 3 isoform X2. (341 aa)
	ING2	Inhibitor of growth protein. (222 aa)
	ENSTTRP00000009296	annotation not available (181 aa)
	HOXB4	Homeobox B4. (251 aa)
	EXT1	Exostosin-1; Belongs to the glycosyltransferase 47 family. (746 aa)
	FUT10	Alpha-(1,3)-fucosyltransferase; Probable fucosyltransferase; Belongs to the glycosyltransferase 10 family. (517 aa)
	CUL3	Cullin-3 isoform X1; Belongs to the cullin family. (745 aa)
	FZD7	Frizzled-7; Belongs to the G-protein coupled receptor Fz/Smo family. (544 aa)

Your Current Organism:

Tursiops truncatus

NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BMI1	ENSTTRP00000000710	ENSTTRP00000006191	ENSTTRP00000000710	Polycomb complex protein BMI-1 isoform X2.	annotation not available	0.705
BMI1	NOTCH1	ENSTTRP00000006191	ENSTTRP00000007173	Polycomb complex protein BMI-1 isoform X2.	Neurogenic locus notch homolog protein 1.	0.571
BMI1	ZBTB16	ENSTTRP00000006191	ENSTTRP00000001426	Polycomb complex protein BMI-1 isoform X2.	Zinc finger and BTB domain-containing protein 16 isoform X1.	0.495
CUL3	ZBTB16	ENSTTRP00000000268	ENSTTRP00000001426	Cullin-3 isoform X1; Belongs to the cullin family.	Zinc finger and BTB domain-containing protein 16 isoform X1.	0.610
ENSTTRP00000000710	BMI1	ENSTTRP00000000710	ENSTTRP00000006191	annotation not available	Polycomb complex protein BMI-1 isoform X2.	0.705
ENSTTRP00000000710	ENSTTRP00000006381	ENSTTRP00000000710	ENSTTRP00000006381	annotation not available	annotation not available	0.493
ENSTTRP00000000710	NOTCH1	ENSTTRP00000000710	ENSTTRP00000007173	annotation not available	Neurogenic locus notch homolog protein 1.	0.563
ENSTTRP00000000710	STRA8	ENSTTRP00000000710	ENSTTRP00000004792	annotation not available	Stimulated by retinoic acid 8.	0.485
ENSTTRP00000006381	ENSTTRP00000000710	ENSTTRP00000006381	ENSTTRP00000000710	annotation not available	annotation not available	0.493
ENSTTRP00000006381	FZD7	ENSTTRP00000006381	ENSTTRP00000000597	annotation not available	Frizzled-7; Belongs to the G-protein coupled receptor Fz/Smo family.	0.946
FZD7	ENSTTRP00000006381	ENSTTRP00000000597	ENSTTRP00000006381	Frizzled-7; Belongs to the G-protein coupled receptor Fz/Smo family.	annotation not available	0.946
NOTCH1	BMI1	ENSTTRP00000007173	ENSTTRP00000006191	Neurogenic locus notch homolog protein 1.	Polycomb complex protein BMI-1 isoform X2.	0.571
NOTCH1	ENSTTRP00000000710	ENSTTRP00000007173	ENSTTRP00000000710	Neurogenic locus notch homolog protein 1.	annotation not available	0.563
STRA8	ENSTTRP00000000710	ENSTTRP00000004792	ENSTTRP00000000710	Stimulated by retinoic acid 8.	annotation not available	0.485
STRA8	ZBTB16	ENSTTRP00000004792	ENSTTRP00000001426	Stimulated by retinoic acid 8.	Zinc finger and BTB domain-containing protein 16 isoform X1.	0.705
ZBTB16	BMI1	ENSTTRP00000001426	ENSTTRP00000006191	Zinc finger and BTB domain-containing protein 16 isoform X1.	Polycomb complex protein BMI-1 isoform X2.	0.495
ZBTB16	CUL3	ENSTTRP00000001426	ENSTTRP00000000268	Zinc finger and BTB domain-containing protein 16 isoform X1.	Cullin-3 isoform X1; Belongs to the cullin family.	0.610
ZBTB16	STRA8	ENSTTRP00000001426	ENSTTRP00000004792	Zinc finger and BTB domain-containing protein 16 isoform X1.	Stimulated by retinoic acid 8.	0.705