30 items (Tursiops truncatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SLC26A4	Pendrin; Sodium-independent transporter of chloride and iodide. Belongs to the SLC26A/SulP transporter (TC 2.A.53) family. (776 aa)
	SLC27A4	Long-chain fatty acid transport protein 4-like. (642 aa)
	SLC7A11	Cystine/glutamate transporter isoform X1. (502 aa)
	SLC34A3	Sodium-dependent phosphate transport protein 2C. (599 aa)
	SLC28A1	Solute carrier family 28 member 1. (620 aa)
	ABCG2	ATP-binding cassette sub-family G member 2. (653 aa)
	CDHR2	Cadherin-related family member 2 isoform X2. (1309 aa)
	ATP6V0A4	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase. (770 aa)
	CYBRD1	Cytochrome b reductase 1 isoform X1. (220 aa)
	SLC7A9	B(0,+)-type amino acid transporter 1. (440 aa)
	CDHR5	Cadherin related family member 5. (755 aa)
	ENSTTRP00000008989	annotation not available (455 aa)
	GNA13	Guanine nucleotide-binding protein subunit alpha-13 isoform X1. (282 aa)
	PDZK1	Na(+)/H(+) exchange regulatory cofactor NHE-RF3. (518 aa)
	SLC9A3	Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. (764 aa)
	CA4	Carbonic anhydrase 4; Belongs to the alpha-carbonic anhydrase family. (290 aa)
	PLB1	Phospholipase B1, membrane-associated. (1444 aa)
	B4GALT1	Beta-1,4-galactosyltransferase 1. (398 aa)
	LRP2	Low-density lipoprotein receptor-related protein 2. (4599 aa)
	SLC28A3	Sodium/nucleoside cotransporter; Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family. (688 aa)
	ENSTTRP00000003608	annotation not available (592 aa)
	SLC6A19	Sodium-dependent neutral amino acid transporter B(0)AT1. (565 aa)
	GNA12	Guanine nucleotide-binding protein subunit alpha-12. (382 aa)
	ACE2	Angiotensin-converting enzyme. (804 aa)
	SLC17A3	LOW QUALITY PROTEIN: sodium-dependent phosphate transport protein 4. (417 aa)
	SLC9A3R1	SLC9A3 regulator 1. (359 aa)
	SLC22A5	Solute carrier family 22 member 5. (557 aa)
	SLC3A1	Neutral and basic amino acid transport protein rBAT. (675 aa)
	LIMA1	LIM domain and actin-binding protein 1 isoform X1. (757 aa)
	aqp1	Aquaporin-1; Belongs to the MIP/aquaporin (TC 1.A.8) family. (251 aa)

Your Current Organism:

Tursiops truncatus

NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABCG2	SLC17A3	ENSTTRP00000014436	ENSTTRP00000002783	ATP-binding cassette sub-family G member 2.	LOW QUALITY PROTEIN: sodium-dependent phosphate transport protein 4.	0.400
ACE2	ENSTTRP00000003608	ENSTTRP00000003366	ENSTTRP00000003608	Angiotensin-converting enzyme.	annotation not available	0.790
ACE2	SLC6A19	ENSTTRP00000003366	ENSTTRP00000003569	Angiotensin-converting enzyme.	Sodium-dependent neutral amino acid transporter B(0)AT1.	0.911
CDHR2	CDHR5	ENSTTRP00000013324	ENSTTRP00000010573	Cadherin-related family member 2 isoform X2.	Cadherin related family member 5.	0.932
CDHR5	CDHR2	ENSTTRP00000010573	ENSTTRP00000013324	Cadherin related family member 5.	Cadherin-related family member 2 isoform X2.	0.932
ENSTTRP00000003608	ACE2	ENSTTRP00000003608	ENSTTRP00000003366	annotation not available	Angiotensin-converting enzyme.	0.790
GNA12	GNA13	ENSTTRP00000003564	ENSTTRP00000008844	Guanine nucleotide-binding protein subunit alpha-12.	Guanine nucleotide-binding protein subunit alpha-13 isoform X1.	0.965
GNA13	GNA12	ENSTTRP00000008844	ENSTTRP00000003564	Guanine nucleotide-binding protein subunit alpha-13 isoform X1.	Guanine nucleotide-binding protein subunit alpha-12.	0.965
PDZK1	SLC22A5	ENSTTRP00000008744	ENSTTRP00000002434	Na(+)/H(+) exchange regulatory cofactor NHE-RF3.	Solute carrier family 22 member 5.	0.576
PDZK1	SLC3A1	ENSTTRP00000008744	ENSTTRP00000001182	Na(+)/H(+) exchange regulatory cofactor NHE-RF3.	Neutral and basic amino acid transport protein rBAT.	0.751
PDZK1	SLC9A3	ENSTTRP00000008744	ENSTTRP00000008669	Na(+)/H(+) exchange regulatory cofactor NHE-RF3.	Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.	0.544
PDZK1	SLC9A3R1	ENSTTRP00000008744	ENSTTRP00000002441	Na(+)/H(+) exchange regulatory cofactor NHE-RF3.	SLC9A3 regulator 1.	0.553
SLC17A3	ABCG2	ENSTTRP00000002783	ENSTTRP00000014436	LOW QUALITY PROTEIN: sodium-dependent phosphate transport protein 4.	ATP-binding cassette sub-family G member 2.	0.400
SLC17A3	SLC34A3	ENSTTRP00000002783	ENSTTRP00000014558	LOW QUALITY PROTEIN: sodium-dependent phosphate transport protein 4.	Sodium-dependent phosphate transport protein 2C.	0.660
SLC22A5	PDZK1	ENSTTRP00000002434	ENSTTRP00000008744	Solute carrier family 22 member 5.	Na(+)/H(+) exchange regulatory cofactor NHE-RF3.	0.576
SLC34A3	SLC17A3	ENSTTRP00000014558	ENSTTRP00000002783	Sodium-dependent phosphate transport protein 2C.	LOW QUALITY PROTEIN: sodium-dependent phosphate transport protein 4.	0.660
SLC34A3	SLC6A19	ENSTTRP00000014558	ENSTTRP00000003569	Sodium-dependent phosphate transport protein 2C.	Sodium-dependent neutral amino acid transporter B(0)AT1.	0.407
SLC34A3	SLC9A3R1	ENSTTRP00000014558	ENSTTRP00000002441	Sodium-dependent phosphate transport protein 2C.	SLC9A3 regulator 1.	0.914
SLC3A1	PDZK1	ENSTTRP00000001182	ENSTTRP00000008744	Neutral and basic amino acid transport protein rBAT.	Na(+)/H(+) exchange regulatory cofactor NHE-RF3.	0.751
SLC3A1	SLC6A19	ENSTTRP00000001182	ENSTTRP00000003569	Neutral and basic amino acid transport protein rBAT.	Sodium-dependent neutral amino acid transporter B(0)AT1.	0.539