STRINGSTRING
ITGA4 ITGA4 ENSTTRP00000016426 ENSTTRP00000016426 LAMB3 LAMB3 LEO1 LEO1 SETD2 SETD2 ITGB5 ITGB5 GRB2 GRB2 MMP8 MMP8 GATA6 GATA6 NR0B1 NR0B1 ITGAV ITGAV CTR9 CTR9 MMP9 MMP9 EOMES EOMES MAP2K1 MAP2K1 VTN VTN ITGA7 ITGA7 LAMA3 LAMA3 MMP15 MMP15 COL12A1 COL12A1 COL11A1 COL11A1 COL4A2 COL4A2 CTNNB1 CTNNB1 COL6A1 COL6A1 MIXL1 MIXL1 ITGA5 ITGA5 LAMB1 LAMB1 INHBA INHBA PAF1 PAF1 NODAL NODAL HMGA2 HMGA2 RTF1 RTF1 COL8A1 COL8A1 MMP14 MMP14 MMP2 MMP2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ITGA4Integrin alpha-4; Belongs to the integrin alpha chain family. (1037 aa)
ENSTTRP00000016426annotation not available (2935 aa)
LAMB3Laminin subunit beta-3. (1172 aa)
LEO1RNA polymerase-associated protein LEO1 isoform X1. (666 aa)
SETD2Histone-lysine N-methyltransferase SETD2. (2054 aa)
ITGB5Integrin beta; Belongs to the integrin beta chain family. (782 aa)
GRB2Growth factor receptor-bound protein 2. (156 aa)
MMP8Neutrophil collagenase. (469 aa)
GATA6Transcription factor GATA-6. (592 aa)
NR0B1Nuclear receptor subfamily 0 group B member 1. (464 aa)
ITGAVIntegrin alpha-V isoform X1; Belongs to the integrin alpha chain family. (1095 aa)
CTR9RNA polymerase-associated protein CTR9 homolog isoform X2. (1173 aa)
MMP9Matrix metalloproteinase-9. (670 aa)
EOMESEomesodermin homolog isoform X2. (684 aa)
MAP2K1Dual specificity mitogen-activated protein kinase kinase 1. (393 aa)
VTNVitronectin. (480 aa)
ITGA7Integrin subunit alpha 7. (1180 aa)
LAMA3Laminin subunit alpha-3 isoform X1. (3336 aa)
MMP15Matrix metalloproteinase-15. (620 aa)
COL12A1Collagen alpha-1(XII) chain isoform X3. (3055 aa)
COL11A1Collagen alpha-1(XI) chain isoform X1. (1780 aa)
COL4A2Collagen alpha-2(IV) chain. (1677 aa)
CTNNB1Catenin beta-1. (781 aa)
COL6A1Collagen alpha-1(VI) chain. (1025 aa)
MIXL1Homeobox protein MIXL1. (237 aa)
ITGA5Integrin subunit alpha 5. (1053 aa)
LAMB1Laminin subunit beta-1. (1799 aa)
INHBAInhibin beta A chain. (421 aa)
PAF1PAF1 homolog, Paf1/RNA polymerase II complex component. (526 aa)
NODALNodal homolog. (348 aa)
HMGA2High mobility group protein HMGI-C. (83 aa)
RTF1RNA polymerase-associated protein RTF1 homolog. (710 aa)
COL8A1Collagen alpha-1(VIII) chain. (738 aa)
MMP14Matrix metallopeptidase 14. (582 aa)
MMP272 kDa type IV collagenase. (657 aa)
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin
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