(13 nodes) Positive regulation of nuclear-transcribed mRNA poly(A) tail shortening network (Tursiops truncatus)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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textmining

co-expression

protein homology

Your Input:
	TOB1	Protein Tob1. (344 aa)
	BTG2	Protein BTG2 isoform X1. (117 aa)
	TNRC6A	Trinucleotide repeat-containing gene 6A protein isoform X9. (1955 aa)
	POLR2G	DNA-directed RNA polymerase II subunit RPB7. (172 aa)
	AGO2	Argonaute RISC catalytic component 2. (852 aa)
	ZFP36	ZFP36 ring finger protein. (322 aa)
	PABPC1	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (620 aa)
	CNOT1	CCR4-NOT transcription complex subunit 1 isoform X4. (2376 aa)
	EIF4ENIF1	Eukaryotic translation initiation factor 4E transporter isoform X2. (980 aa)
	TNRC6C	Trinucleotide repeat-containing gene 6C protein isoform X3. (1736 aa)
	TNRC6B	Trinucleotide repeat-containing gene 6B protein isoform X8. (1756 aa)
	CPEB3	Cytoplasmic polyadenylation element-binding protein 3 isoform X1. (690 aa)
	CNOT7	CCR4-NOT transcription complex subunit 7. (285 aa)

Your Current Organism:

Tursiops truncatus

NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGO2	CNOT1	ENSTTRP00000002693	ENSTTRP00000008020	Argonaute RISC catalytic component 2.	CCR4-NOT transcription complex subunit 1 isoform X4.	0.638
AGO2	CNOT7	ENSTTRP00000002693	ENSTTRP00000011922	Argonaute RISC catalytic component 2.	CCR4-NOT transcription complex subunit 7.	0.488
AGO2	PABPC1	ENSTTRP00000002693	ENSTTRP00000004419	Argonaute RISC catalytic component 2.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.475
AGO2	POLR2G	ENSTTRP00000002693	ENSTTRP00000002322	Argonaute RISC catalytic component 2.	DNA-directed RNA polymerase II subunit RPB7.	0.569
AGO2	TNRC6A	ENSTTRP00000002693	ENSTTRP00000001884	Argonaute RISC catalytic component 2.	Trinucleotide repeat-containing gene 6A protein isoform X9.	0.995
AGO2	TNRC6B	ENSTTRP00000002693	ENSTTRP00000010892	Argonaute RISC catalytic component 2.	Trinucleotide repeat-containing gene 6B protein isoform X8.	0.772
AGO2	TNRC6C	ENSTTRP00000002693	ENSTTRP00000010270	Argonaute RISC catalytic component 2.	Trinucleotide repeat-containing gene 6C protein isoform X3.	0.944
BTG2	CNOT1	ENSTTRP00000000789	ENSTTRP00000008020	Protein BTG2 isoform X1.	CCR4-NOT transcription complex subunit 1 isoform X4.	0.692
BTG2	CNOT7	ENSTTRP00000000789	ENSTTRP00000011922	Protein BTG2 isoform X1.	CCR4-NOT transcription complex subunit 7.	0.848
BTG2	TOB1	ENSTTRP00000000789	ENSTTRP00000002565	Protein BTG2 isoform X1.	Protein Tob1.	0.585
CNOT1	AGO2	ENSTTRP00000008020	ENSTTRP00000002693	CCR4-NOT transcription complex subunit 1 isoform X4.	Argonaute RISC catalytic component 2.	0.638
CNOT1	BTG2	ENSTTRP00000008020	ENSTTRP00000000789	CCR4-NOT transcription complex subunit 1 isoform X4.	Protein BTG2 isoform X1.	0.692
CNOT1	CNOT7	ENSTTRP00000008020	ENSTTRP00000011922	CCR4-NOT transcription complex subunit 1 isoform X4.	CCR4-NOT transcription complex subunit 7.	0.996
CNOT1	EIF4ENIF1	ENSTTRP00000008020	ENSTTRP00000009757	CCR4-NOT transcription complex subunit 1 isoform X4.	Eukaryotic translation initiation factor 4E transporter isoform X2.	0.819
CNOT1	PABPC1	ENSTTRP00000008020	ENSTTRP00000004419	CCR4-NOT transcription complex subunit 1 isoform X4.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.675
CNOT1	TNRC6A	ENSTTRP00000008020	ENSTTRP00000001884	CCR4-NOT transcription complex subunit 1 isoform X4.	Trinucleotide repeat-containing gene 6A protein isoform X9.	0.796
CNOT1	TNRC6B	ENSTTRP00000008020	ENSTTRP00000010892	CCR4-NOT transcription complex subunit 1 isoform X4.	Trinucleotide repeat-containing gene 6B protein isoform X8.	0.663
CNOT1	TNRC6C	ENSTTRP00000008020	ENSTTRP00000010270	CCR4-NOT transcription complex subunit 1 isoform X4.	Trinucleotide repeat-containing gene 6C protein isoform X3.	0.886
CNOT1	TOB1	ENSTTRP00000008020	ENSTTRP00000002565	CCR4-NOT transcription complex subunit 1 isoform X4.	Protein Tob1.	0.739
CNOT1	ZFP36	ENSTTRP00000008020	ENSTTRP00000003339	CCR4-NOT transcription complex subunit 1 isoform X4.	ZFP36 ring finger protein.	0.687