(10 nodes) Cardiac muscle cell myoblast differentiation network (Tursiops truncatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TBX2	T-box transcription factor TBX2. (703 aa)
	SRF	Serum response factor isoform X2. (509 aa)
	NOTCH1	Neurogenic locus notch homolog protein 1. (2527 aa)
	ENSTTRP00000009296	annotation not available (181 aa)
	ITGB1	Integrin beta; Belongs to the integrin beta chain family. (786 aa)
	LOC101333926	RE1-silencing transcription factor-like. (974 aa)
	TBXT	Brachyury protein isoform X1. (435 aa)
	ISL1	Insulin gene enhancer protein ISL-1. (349 aa)
	MYOCD	Myocardin isoform X1. (968 aa)
	REST	RE1-silencing transcription factor. (656 aa)

Your Current Organism:

Tursiops truncatus

NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ISL1	TBX2	ENSTTRP00000010273	ENSTTRP00000004276	Insulin gene enhancer protein ISL-1.	T-box transcription factor TBX2.	0.551
ITGB1	SRF	ENSTTRP00000009434	ENSTTRP00000006636	Integrin beta; Belongs to the integrin beta chain family.	Serum response factor isoform X2.	0.621
MYOCD	SRF	ENSTTRP00000002715	ENSTTRP00000006636	Myocardin isoform X1.	Serum response factor isoform X2.	0.988
SRF	ITGB1	ENSTTRP00000006636	ENSTTRP00000009434	Serum response factor isoform X2.	Integrin beta; Belongs to the integrin beta chain family.	0.621
SRF	MYOCD	ENSTTRP00000006636	ENSTTRP00000002715	Serum response factor isoform X2.	Myocardin isoform X1.	0.988
TBX2	ISL1	ENSTTRP00000004276	ENSTTRP00000010273	T-box transcription factor TBX2.	Insulin gene enhancer protein ISL-1.	0.551