STRINGSTRING
ENSTTRP00000002832 ENSTTRP00000002832 PNPT1 PNPT1 RBM24 RBM24 VIM VIM HNRNPA0 HNRNPA0 EIF4A3 EIF4A3 FMR1 FMR1 BTG2 BTG2 FASTK FASTK RBM46 RBM46 TARDBP TARDBP YBX1 YBX1 PCBP4 PCBP4 DCPS DCPS EXOSC9 EXOSC9 DCP2 DCP2 ENSTTRP00000001654 ENSTTRP00000001654 YTHDF1 YTHDF1 TNRC6A TNRC6A GDNF GDNF FASTKD1 FASTKD1 DHX34 DHX34 POLR2G POLR2G TRAF2 TRAF2 TOB1 TOB1 PAN3 PAN3 PARN PARN AGO2 AGO2 PLEKHN1 PLEKHN1 SECISBP2 SECISBP2 BOLL BOLL ZFP36L1 ZFP36L1 SAMD4B SAMD4B ZFP36 ZFP36 TENT5A TENT5A VIP VIP IKBKE IKBKE FASTKD3 FASTKD3 PCID2 PCID2 SYNCRIP SYNCRIP LSM1 LSM1 PABPN1L PABPN1L PABPC1 PABPC1 CNOT2 CNOT2 PUM2 PUM2 HNRNPU HNRNPU NBAS NBAS MYD88 MYD88 CNOT6L CNOT6L GTPBP1 GTPBP1 ENSTTRP00000005476 ENSTTRP00000005476 PKP3 PKP3 ZC3HAV1 ZC3HAV1 ZFP36L2 ZFP36L2 TENT5B TENT5B CNOT3 CNOT3 CSDC2 CSDC2 TTC5 TTC5 PAN2 PAN2 EXOSC7 EXOSC7 IGF2BP1 IGF2BP1 CALCR CALCR PUM1 PUM1 HNRNPD HNRNPD PABPC1L PABPC1L RNASEL RNASEL DHX9 DHX9 APEX1 APEX1 EXOSC8 EXOSC8 MYEF2 MYEF2 DCP1A DCP1A MEX3D MEX3D ALKBH5 ALKBH5 IGF2BP2 IGF2BP2 SAMD4A SAMD4A NANOS3 NANOS3 CNOT1 CNOT1 RC3H1 RC3H1 ZC3H12A ZC3H12A PRR5L PRR5L IGF2BP3 IGF2BP3 RBM8A RBM8A DIS3L2 DIS3L2 AXIN2 AXIN2 CNOT6 CNOT6 PATL1 PATL1 TBRG4 TBRG4 FASTKD2 FASTKD2 MOV10 MOV10 E2F1 E2F1 ELAVL1 ELAVL1 FXR2 FXR2 EIF4ENIF1 EIF4ENIF1 DND1 DND1 PNLDC1 PNLDC1 MEIOC MEIOC TENT5C TENT5C HNRNPAB HNRNPAB TNRC6C TNRC6C GIGYF2 GIGYF2 TNRC6B TNRC6B UPF1 UPF1 EXOSC3 EXOSC3 MAPKAPK2 MAPKAPK2 CPEB3 CPEB3 ELAVL4 ELAVL4 CNOT7 CNOT7 ENSTTRP00000012002 ENSTTRP00000012002 FTO FTO EXOSC5 EXOSC5 ZC3H14 ZC3H14 SLC11A1 SLC11A1 A1CF A1CF TRAF5 TRAF5 NOCT NOCT YTHDF2 YTHDF2 RBM10 RBM10 ANGEL2 ANGEL2 APOBEC1 APOBEC1 NANOS2 NANOS2 PABPC4 PABPC4 TRAF3IP2 TRAF3IP2 YTHDF3 YTHDF3 FXR1 FXR1 PDE12 PDE12 CARHSP1 CARHSP1 AGO3 AGO3 THRAP3 THRAP3 METTL14 METTL14 EXOSC2 EXOSC2 ROCK1 ROCK1 PKP1 PKP1 FUS FUS CSDE1 CSDE1 RBM38 RBM38 LARP1 LARP1 CNOT8 CNOT8 RIDA RIDA TRIM71 TRIM71 DHX36 DHX36 CASC3 CASC3 RC3H2 RC3H2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSTTRP00000002832annotation not available (618 aa)
PNPT1Polyribonucleotide nucleotidyltransferase 1, mitochondrial isoform X1. (729 aa)
RBM24RNA-binding protein 24. (237 aa)
VIMVimentin; Belongs to the intermediate filament family. (466 aa)
HNRNPA0Heterogeneous nuclear ribonucleoprotein A0. (303 aa)
EIF4A3Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family. (354 aa)
FMR1Synaptic functional regulator FMR1 isoform X1. (597 aa)
BTG2Protein BTG2 isoform X1. (117 aa)
FASTKFas-activated serine/threonine kinase. (539 aa)
RBM46Probable RNA-binding protein 46. (533 aa)
TARDBPTAR DNA-binding protein 43. (411 aa)
YBX1Nuclease-sensitive element-binding protein 1 isoform X1. (316 aa)
PCBP4poly(rC) binding protein 4. (416 aa)
DCPSDecapping enzyme, scavenger. (337 aa)
EXOSC9Exosome complex component RRP45. (456 aa)
DCP2m7GpppN-mRNA hydrolase isoform X1. (417 aa)
ENSTTRP00000001654annotation not available (218 aa)
YTHDF1YTH domain-containing family protein 1 isoform X2. (554 aa)
TNRC6ATrinucleotide repeat-containing gene 6A protein isoform X9. (1955 aa)
GDNFGlial cell line-derived neurotrophic factor isoform X2. (211 aa)
FASTKD1FAST kinase domain-containing protein 1, mitochondrial isoform X1. (845 aa)
DHX34Probable ATP-dependent RNA helicase DHX34. (1139 aa)
POLR2GDNA-directed RNA polymerase II subunit RPB7. (172 aa)
TRAF2TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (504 aa)
TOB1Protein Tob1. (344 aa)
PAN3PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] (739 aa)
PARNpoly(A)-specific ribonuclease PARN isoform X2. (627 aa)
AGO2Argonaute RISC catalytic component 2. (852 aa)
PLEKHN1Pleckstrin homology domain containing N1. (606 aa)
SECISBP2Selenocysteine insertion sequence-binding protein 2 isoform X3. (847 aa)
BOLLProtein boule-like isoform X1. (334 aa)
ZFP36L1mRNA decay activator protein ZFP36L1. (338 aa)
SAMD4BProtein Smaug homolog 2. (686 aa)
ZFP36ZFP36 ring finger protein. (322 aa)
TENT5AProtein FAM46A. (521 aa)
VIPVIP peptides. (170 aa)
IKBKEInhibitor of nuclear factor kappa-B kinase subunit epsilon-like. (718 aa)
FASTKD3FAST kinase domain-containing protein 3, mitochondrial isoform X1. (661 aa)
PCID2PCI domain-containing protein 2. (433 aa)
SYNCRIPHeterogeneous nuclear ribonucleoprotein Q isoform X1. (623 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Plays a role in the degradation of histone mRNAs, the only eukaryotic mRNAs that are not polyadenylated. Probably also part of an LSm subunits-containing complex involved in the general process of mRNA degradation. (133 aa)
PABPN1LPABPN1 like, cytoplasmic. (277 aa)
PABPC1Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (620 aa)
CNOT2CCR4-NOT transcription complex subunit 2 isoform X2. (542 aa)
PUM2Pumilio homolog 2 isoform X1. (1063 aa)
HNRNPUHeterogeneous nuclear ribonucleoprotein U isoform X1. (818 aa)
NBASNeuroblastoma-amplified sequence. (2365 aa)
MYD88MYD88 innate immune signal transduction adaptor. (296 aa)
CNOT6LCCR4-NOT transcription complex subunit 6-like isoform X6. (482 aa)
GTPBP1GTP-binding protein 1 isoform X1. (669 aa)
ENSTTRP00000005476annotation not available (451 aa)
PKP3Plakophilin 3. (796 aa)
ZC3HAV1Poly [ADP-ribose] polymerase. (795 aa)
ZFP36L2mRNA decay activator protein ZFP36L2. (494 aa)
TENT5BProtein FAM46B. (340 aa)
CNOT3CCR4-NOT transcription complex subunit 3. (559 aa)
CSDC2Cold shock domain-containing protein C2. (153 aa)
TTC5Tetratricopeptide repeat protein 5 isoform X1. (440 aa)
PAN2PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...] (1199 aa)
EXOSC7Exosome complex component RRP42. (291 aa)
IGF2BP1Insulin-like growth factor 2 mRNA-binding protein 1. (577 aa)
CALCRCalcitonin receptor isoform X2; Belongs to the G-protein coupled receptor 2 family. (486 aa)
PUM1Pumilio homolog 1 isoform X5. (1223 aa)
HNRNPDHeterogeneous nuclear ribonucleoprotein D0 isoform X1. (355 aa)
PABPC1LPolyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (585 aa)
RNASEL2-5A-dependent ribonuclease isoform X2. (736 aa)
DHX9ATP-dependent RNA helicase A isoform X1. (1153 aa)
APEX1DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. (235 aa)
EXOSC8Exosome complex component RRP43. (271 aa)
MYEF2Myelin expression factor 2 isoform X1. (596 aa)
DCP1AmRNA-decapping enzyme 1A isoform X1. (532 aa)
MEX3DRNA-binding protein MEX3D. (499 aa)
ALKBH5RNA demethylase ALKBH5 isoform X2. (445 aa)
IGF2BP2Insulin-like growth factor 2 mRNA-binding protein 2. (580 aa)
SAMD4AProtein Smaug homolog 1. (717 aa)
NANOS3Nanos C2HC-type zinc finger 3. (169 aa)
CNOT1CCR4-NOT transcription complex subunit 1 isoform X4. (2376 aa)
RC3H1Roquin-1 isoform X1. (1135 aa)
ZC3H12AEndoribonuclease ZC3H12A. (598 aa)
PRR5LProline-rich protein 5-like isoform X3. (368 aa)
IGF2BP3Insulin-like growth factor 2 mRNA-binding protein 3. (579 aa)
RBM8ARNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (151 aa)
DIS3L2DIS3-like exonuclease 2 isoform X2. (801 aa)
AXIN2Axin-2-like. (839 aa)
CNOT6CCR4-NOT transcription complex subunit 6 isoform X1. (557 aa)
PATL1Protein PAT1 homolog 1 isoform X2. (655 aa)
TBRG4Protein TBRG4. (631 aa)
FASTKD2FAST kinase domain-containing protein 2, mitochondrial isoform X1. (704 aa)
MOV10Putative helicase MOV-10. (997 aa)
E2F1Transcription factor E2F1 isoform X1. (437 aa)
ELAVL1ELAV-like protein 1. (326 aa)
FXR2Fragile X mental retardation syndrome-related protein 2 isoform X1. (695 aa)
EIF4ENIF1Eukaryotic translation initiation factor 4E transporter isoform X2. (980 aa)
DND1Dead end protein homolog 1. (303 aa)
PNLDC1poly(A)-specific ribonuclease PARN-like domain-containing protein 1 isoform X2. (530 aa)
MEIOCMeiosis-specific coiled-coil domain-containing protein MEIOC. (625 aa)
TENT5CProtein FAM46C. (391 aa)
HNRNPABHeterogeneous nuclear ribonucleoprotein A/B isoform X3. (299 aa)
TNRC6CTrinucleotide repeat-containing gene 6C protein isoform X3. (1736 aa)
GIGYF2PERQ amino acid-rich with GYF domain-containing protein 2 isoform X1. (1290 aa)
TNRC6BTrinucleotide repeat-containing gene 6B protein isoform X8. (1756 aa)
UPF1Regulator of nonsense transcripts 1 isoform X2. (1112 aa)
EXOSC3Exosome complex component RRP40 isoform X1. (275 aa)
MAPKAPK2MAP kinase-activated protein kinase 2. (400 aa)
CPEB3Cytoplasmic polyadenylation element-binding protein 3 isoform X1. (690 aa)
ELAVL4ELAV like RNA binding protein 4. (381 aa)
CNOT7CCR4-NOT transcription complex subunit 7. (285 aa)
ENSTTRP00000012002annotation not available (307 aa)
FTOAlpha-ketoglutarate-dependent dioxygenase FTO isoform X1. (505 aa)
EXOSC5Exosome complex component RRP46. (235 aa)
ZC3H14Zinc finger CCCH domain-containing protein 14 isoform X1. (731 aa)
SLC11A1Natural resistance-associated macrophage protein 1. (536 aa)
A1CFAPOBEC1 complementation factor isoform X3. (593 aa)
TRAF5TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (559 aa)
NOCTNocturnin. (383 aa)
YTHDF2YTH domain-containing family protein 2. (573 aa)
RBM10RNA binding motif protein 10. (931 aa)
ANGEL2Protein angel homolog 2 isoform X1. (544 aa)
APOBEC1C->U-editing enzyme APOBEC-1 isoform X2. (187 aa)
NANOS2Nanos homolog 2; Belongs to the nanos family. (138 aa)
PABPC4Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (555 aa)
TRAF3IP2Adapter protein CIKS isoform X1. (572 aa)
YTHDF3YTH domain-containing family protein 3 isoform X2. (575 aa)
FXR1Fragile X mental retardation syndrome-related protein 1 isoform X3. (620 aa)
PDE122',5'-phosphodiesterase 12. (609 aa)
CARHSP1Calcium regulated heat stable protein 1. (147 aa)
AGO3Protein argonaute-3; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs. (853 aa)
THRAP3Thyroid hormone receptor-associated protein 3 isoform X1. (958 aa)
METTL14N6-adenosine-methyltransferase subunit METTL14 isoform X1; Belongs to the MT-A70-like family. (468 aa)
EXOSC2Exosome complex component RRP4. (289 aa)
ROCK1Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. (1353 aa)
PKP1Plakophilin-1-like. (732 aa)
FUSRNA-binding protein FUS. (506 aa)
CSDE1Cold shock domain-containing protein E1. (813 aa)
RBM38RNA binding motif protein 38. (236 aa)
LARP1La-related protein 1 isoform X2. (954 aa)
CNOT8CCR4-NOT transcription complex subunit 8 isoform X1. (292 aa)
RIDARibonuclease UK114. (133 aa)
TRIM71E3 ubiquitin-protein ligase TRIM71. (613 aa)
DHX36ATP-dependent RNA helicase DHX36 isoform X1. (1012 aa)
CASC3Protein CASC3. (604 aa)
RC3H2Roquin-2 isoform X1. (1191 aa)
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin
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