(12 nodes) CCR4-NOT complex network (Tursiops truncatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CNOT2	CCR4-NOT transcription complex subunit 2 isoform X2. (542 aa)
	CNOT4	CCR4-NOT transcription complex subunit 4 isoform X1. (767 aa)
	CNOT6L	CCR4-NOT transcription complex subunit 6-like isoform X6. (482 aa)
	ENSTTRP00000005476	annotation not available (451 aa)
	CNOT3	CCR4-NOT transcription complex subunit 3. (559 aa)
	CNOT1	CCR4-NOT transcription complex subunit 1 isoform X4. (2376 aa)
	CNOT6	CCR4-NOT transcription complex subunit 6 isoform X1. (557 aa)
	PLCD4	Phosphoinositide phospholipase C. (760 aa)
	CNOT7	CCR4-NOT transcription complex subunit 7. (285 aa)
	CNOT8	CCR4-NOT transcription complex subunit 8 isoform X1. (292 aa)
	CNOT11	CCR4-NOT transcription complex subunit 11. (512 aa)
	CNOT10	CCR4-NOT transcription complex subunit 10 isoform X3. (743 aa)

Your Current Organism:

Tursiops truncatus

NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CNOT1	CNOT10	ENSTTRP00000008020	ENSTTRP00000015907	CCR4-NOT transcription complex subunit 1 isoform X4.	CCR4-NOT transcription complex subunit 10 isoform X3.	0.999
CNOT1	CNOT11	ENSTTRP00000008020	ENSTTRP00000015593	CCR4-NOT transcription complex subunit 1 isoform X4.	CCR4-NOT transcription complex subunit 11.	0.999
CNOT1	CNOT2	ENSTTRP00000008020	ENSTTRP00000004552	CCR4-NOT transcription complex subunit 1 isoform X4.	CCR4-NOT transcription complex subunit 2 isoform X2.	0.999
CNOT1	CNOT3	ENSTTRP00000008020	ENSTTRP00000006213	CCR4-NOT transcription complex subunit 1 isoform X4.	CCR4-NOT transcription complex subunit 3.	0.999
CNOT1	CNOT4	ENSTTRP00000008020	ENSTTRP00000004814	CCR4-NOT transcription complex subunit 1 isoform X4.	CCR4-NOT transcription complex subunit 4 isoform X1.	0.999
CNOT1	CNOT6	ENSTTRP00000008020	ENSTTRP00000008882	CCR4-NOT transcription complex subunit 1 isoform X4.	CCR4-NOT transcription complex subunit 6 isoform X1.	0.984
CNOT1	CNOT6L	ENSTTRP00000008020	ENSTTRP00000005290	CCR4-NOT transcription complex subunit 1 isoform X4.	CCR4-NOT transcription complex subunit 6-like isoform X6.	0.989
CNOT1	CNOT7	ENSTTRP00000008020	ENSTTRP00000011922	CCR4-NOT transcription complex subunit 1 isoform X4.	CCR4-NOT transcription complex subunit 7.	0.996
CNOT1	CNOT8	ENSTTRP00000008020	ENSTTRP00000015110	CCR4-NOT transcription complex subunit 1 isoform X4.	CCR4-NOT transcription complex subunit 8 isoform X1.	0.990
CNOT1	ENSTTRP00000005476	ENSTTRP00000008020	ENSTTRP00000005476	CCR4-NOT transcription complex subunit 1 isoform X4.	annotation not available	0.922
CNOT10	CNOT1	ENSTTRP00000015907	ENSTTRP00000008020	CCR4-NOT transcription complex subunit 10 isoform X3.	CCR4-NOT transcription complex subunit 1 isoform X4.	0.999
CNOT10	CNOT11	ENSTTRP00000015907	ENSTTRP00000015593	CCR4-NOT transcription complex subunit 10 isoform X3.	CCR4-NOT transcription complex subunit 11.	0.999
CNOT10	CNOT2	ENSTTRP00000015907	ENSTTRP00000004552	CCR4-NOT transcription complex subunit 10 isoform X3.	CCR4-NOT transcription complex subunit 2 isoform X2.	0.999
CNOT10	CNOT3	ENSTTRP00000015907	ENSTTRP00000006213	CCR4-NOT transcription complex subunit 10 isoform X3.	CCR4-NOT transcription complex subunit 3.	0.995
CNOT10	CNOT4	ENSTTRP00000015907	ENSTTRP00000004814	CCR4-NOT transcription complex subunit 10 isoform X3.	CCR4-NOT transcription complex subunit 4 isoform X1.	0.991
CNOT10	CNOT6	ENSTTRP00000015907	ENSTTRP00000008882	CCR4-NOT transcription complex subunit 10 isoform X3.	CCR4-NOT transcription complex subunit 6 isoform X1.	0.963
CNOT10	CNOT6L	ENSTTRP00000015907	ENSTTRP00000005290	CCR4-NOT transcription complex subunit 10 isoform X3.	CCR4-NOT transcription complex subunit 6-like isoform X6.	0.954
CNOT10	CNOT7	ENSTTRP00000015907	ENSTTRP00000011922	CCR4-NOT transcription complex subunit 10 isoform X3.	CCR4-NOT transcription complex subunit 7.	0.979
CNOT10	CNOT8	ENSTTRP00000015907	ENSTTRP00000015110	CCR4-NOT transcription complex subunit 10 isoform X3.	CCR4-NOT transcription complex subunit 8 isoform X1.	0.952
CNOT10	ENSTTRP00000005476	ENSTTRP00000015907	ENSTTRP00000005476	CCR4-NOT transcription complex subunit 10 isoform X3.	annotation not available	0.727