(18 nodes) TGF-beta propeptide network (Tursiops truncatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101325454	Bone morphogenetic protein 8B. (241 aa)
	GDF5	Growth/differentiation factor 5. (489 aa)
	BMP6	Bone morphogenetic protein 6. (304 aa)
	BMP7	Bone morphogenetic protein 7 isoform X2. (431 aa)
	TGFB3	Transforming growth factor beta; Belongs to the TGF-beta family. (411 aa)
	INHBB	Inhibin beta B chain. (407 aa)
	MSTN	Growth/differentiation factor 8. (375 aa)
	TGFB2	Transforming growth factor beta; Belongs to the TGF-beta family. (416 aa)
	BMP10	Bone morphogenetic protein 10. (423 aa)
	GDF2	Growth/differentiation factor 2. (431 aa)
	TGFB1	Transforming growth factor beta 1. (338 aa)
	GDF6	Growth/differentiation factor 6. (458 aa)
	GDF11	Growth differentiation factor 11. (313 aa)
	BMP4	Bone morphogenetic protein 4. (407 aa)
	BMP5	Bone morphogenetic protein 5 isoform X2. (454 aa)
	BMP3	Bone morphogenetic protein 3; Belongs to the TGF-beta family. (475 aa)
	INHBA	Inhibin beta A chain. (421 aa)
	BMP2	Bone morphogenetic protein 2. (388 aa)

Your Current Organism:

Tursiops truncatus

NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BMP10	BMP2	ENSTTRP00000012877	ENSTTRP00000002383	Bone morphogenetic protein 10.	Bone morphogenetic protein 2.	0.417
BMP10	BMP4	ENSTTRP00000012877	ENSTTRP00000008787	Bone morphogenetic protein 10.	Bone morphogenetic protein 4.	0.630
BMP10	BMP5	ENSTTRP00000012877	ENSTTRP00000005374	Bone morphogenetic protein 10.	Bone morphogenetic protein 5 isoform X2.	0.653
BMP10	BMP7	ENSTTRP00000012877	ENSTTRP00000014836	Bone morphogenetic protein 10.	Bone morphogenetic protein 7 isoform X2.	0.423
BMP10	GDF2	ENSTTRP00000012877	ENSTTRP00000012735	Bone morphogenetic protein 10.	Growth/differentiation factor 2.	0.946
BMP10	GDF5	ENSTTRP00000012877	ENSTTRP00000016136	Bone morphogenetic protein 10.	Growth/differentiation factor 5.	0.406
BMP10	MSTN	ENSTTRP00000012877	ENSTTRP00000013154	Bone morphogenetic protein 10.	Growth/differentiation factor 8.	0.418
BMP2	BMP10	ENSTTRP00000002383	ENSTTRP00000012877	Bone morphogenetic protein 2.	Bone morphogenetic protein 10.	0.417
BMP2	BMP4	ENSTTRP00000002383	ENSTTRP00000008787	Bone morphogenetic protein 2.	Bone morphogenetic protein 4.	0.899
BMP2	BMP5	ENSTTRP00000002383	ENSTTRP00000005374	Bone morphogenetic protein 2.	Bone morphogenetic protein 5 isoform X2.	0.616
BMP2	BMP6	ENSTTRP00000002383	ENSTTRP00000015103	Bone morphogenetic protein 2.	Bone morphogenetic protein 6.	0.938
BMP2	BMP7	ENSTTRP00000002383	ENSTTRP00000014836	Bone morphogenetic protein 2.	Bone morphogenetic protein 7 isoform X2.	0.719
BMP2	GDF5	ENSTTRP00000002383	ENSTTRP00000016136	Bone morphogenetic protein 2.	Growth/differentiation factor 5.	0.543
BMP2	GDF6	ENSTTRP00000002383	ENSTTRP00000011723	Bone morphogenetic protein 2.	Growth/differentiation factor 6.	0.435
BMP2	LOC101325454	ENSTTRP00000002383	ENSTTRP00000010942	Bone morphogenetic protein 2.	Bone morphogenetic protein 8B.	0.571
BMP2	TGFB1	ENSTTRP00000002383	ENSTTRP00000012180	Bone morphogenetic protein 2.	Transforming growth factor beta 1.	0.504
BMP2	TGFB2	ENSTTRP00000002383	ENSTTRP00000012883	Bone morphogenetic protein 2.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.431
BMP3	BMP7	ENSTTRP00000003765	ENSTTRP00000014836	Bone morphogenetic protein 3; Belongs to the TGF-beta family.	Bone morphogenetic protein 7 isoform X2.	0.418
BMP3	TGFB1	ENSTTRP00000003765	ENSTTRP00000012180	Bone morphogenetic protein 3; Belongs to the TGF-beta family.	Transforming growth factor beta 1.	0.493
BMP4	BMP10	ENSTTRP00000008787	ENSTTRP00000012877	Bone morphogenetic protein 4.	Bone morphogenetic protein 10.	0.630