(11 nodes) Two pore domain potassium channel network (Delphinapterus leucas)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KCNK1	Potassium channel subfamily K member. (336 aa)
	KCNK9	Potassium channel subfamily K member. (374 aa)
	ZFAT	Zinc finger protein ZFAT isoform X1. (1256 aa)
	KCNK18	LOW QUALITY PROTEIN: potassium channel subfamily K member 18; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (380 aa)
	KCNK12	Potassium channel subfamily K member 12; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (430 aa)
	KCNK3	Potassium channel subfamily K member. (398 aa)
	KCNK10	Potassium channel subfamily K member 10; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (538 aa)
	KCNK13	Potassium channel subfamily K member 13; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (410 aa)
	KCNK4	Potassium channel subfamily K member 4; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (401 aa)
	KCNK2	Potassium channel subfamily K member 2; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (427 aa)
	KCNK15	Potassium channel subfamily K member 15; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (333 aa)

Your Current Organism:

Delphinapterus leucas

NCBI taxonomy Id: 9749
Other names: D. leucas, beluga, beluga whale, white whale

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KCNK1	KCNK10	A0A2Y9LGT2	A0A2Y9ND68	Potassium channel subfamily K member.	Potassium channel subfamily K member 10; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	0.643
KCNK1	KCNK12	A0A2Y9LGT2	A0A2Y9N5T9	Potassium channel subfamily K member.	Potassium channel subfamily K member 12; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	0.605
KCNK1	KCNK13	A0A2Y9LGT2	A0A2Y9NGC7	Potassium channel subfamily K member.	Potassium channel subfamily K member 13; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	0.547
KCNK1	KCNK15	A0A2Y9LGT2	A0A2Y9PZB3	Potassium channel subfamily K member.	Potassium channel subfamily K member 15; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	0.605
KCNK1	KCNK18	A0A2Y9LGT2	A0A2Y9MS63	Potassium channel subfamily K member.	LOW QUALITY PROTEIN: potassium channel subfamily K member 18; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	0.755
KCNK1	KCNK2	A0A2Y9LGT2	A0A2Y9PQ37	Potassium channel subfamily K member.	Potassium channel subfamily K member 2; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	0.701
KCNK1	KCNK3	A0A2Y9LGT2	A0A2Y9NAK8	Potassium channel subfamily K member.	Potassium channel subfamily K member.	0.495
KCNK1	KCNK4	A0A2Y9LGT2	A0A2Y9PNP3	Potassium channel subfamily K member.	Potassium channel subfamily K member 4; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	0.568
KCNK1	KCNK9	A0A2Y9LGT2	A0A2Y9LNF6	Potassium channel subfamily K member.	Potassium channel subfamily K member.	0.495
KCNK10	KCNK1	A0A2Y9ND68	A0A2Y9LGT2	Potassium channel subfamily K member 10; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	Potassium channel subfamily K member.	0.643
KCNK10	KCNK12	A0A2Y9ND68	A0A2Y9N5T9	Potassium channel subfamily K member 10; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	Potassium channel subfamily K member 12; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	0.665
KCNK10	KCNK13	A0A2Y9ND68	A0A2Y9NGC7	Potassium channel subfamily K member 10; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	Potassium channel subfamily K member 13; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	0.574
KCNK10	KCNK15	A0A2Y9ND68	A0A2Y9PZB3	Potassium channel subfamily K member 10; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	Potassium channel subfamily K member 15; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	0.603
KCNK10	KCNK18	A0A2Y9ND68	A0A2Y9MS63	Potassium channel subfamily K member 10; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	LOW QUALITY PROTEIN: potassium channel subfamily K member 18; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	0.592
KCNK10	KCNK2	A0A2Y9ND68	A0A2Y9PQ37	Potassium channel subfamily K member 10; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	Potassium channel subfamily K member 2; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	0.961
KCNK10	KCNK3	A0A2Y9ND68	A0A2Y9NAK8	Potassium channel subfamily K member 10; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	Potassium channel subfamily K member.	0.463
KCNK10	KCNK4	A0A2Y9ND68	A0A2Y9PNP3	Potassium channel subfamily K member 10; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	Potassium channel subfamily K member 4; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	0.416
KCNK10	KCNK9	A0A2Y9ND68	A0A2Y9LNF6	Potassium channel subfamily K member 10; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	Potassium channel subfamily K member.	0.463
KCNK12	KCNK1	A0A2Y9N5T9	A0A2Y9LGT2	Potassium channel subfamily K member 12; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	Potassium channel subfamily K member.	0.605
KCNK12	KCNK10	A0A2Y9N5T9	A0A2Y9ND68	Potassium channel subfamily K member 12; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	Potassium channel subfamily K member 10; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	0.665