STRINGSTRING
STX7 STX7 VAMP4 VAMP4 STX6 STX6 VTI1A VTI1A VTI1B VTI1B YKT6 YKT6 STX8 STX8 STX16 STX16
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
STX7Syntaxin-7 isoform X1; Belongs to the syntaxin family. (261 aa)
VAMP4Vesicle-associated membrane protein 4 isoform X1. (141 aa)
STX6Syntaxin-6 isoform X3; Belongs to the syntaxin family. (255 aa)
VTI1AVesicle transport through interaction with t-SNAREs homolog 1A isoform X1. (229 aa)
VTI1BVesicle transport through interaction with t-SNAREs homolog 1B. (232 aa)
YKT6Synaptobrevin homolog YKT6 isoform X1; Belongs to the synaptobrevin family. (202 aa)
STX8Syntaxin-8 isoform X1. (236 aa)
STX16Syntaxin-16 isoform X1; Belongs to the syntaxin family. (309 aa)
Your Current Organism:
Delphinapterus leucas
NCBI taxonomy Id: 9749
Other names: D. leucas, beluga, beluga whale, white whale
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