7 items (Delphinapterus leucas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SMARCB1	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family. (385 aa)
	TAF1B	TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1. (590 aa)
	SMARCA4	Transcription activator BRG1 isoform X4. (1648 aa)
	UBTF	Nucleolar transcription factor 1 isoform X1. (757 aa)
	PIH1D1	PIH1 domain-containing protein 1. (290 aa)
	TAF1C	TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X1. (855 aa)
	RRN3	RNA polymerase I-specific transcription initiation factor RRN3 isoform X1. (651 aa)

Your Current Organism:

Delphinapterus leucas

NCBI taxonomy Id: 9749
Other names: D. leucas, beluga, beluga whale, white whale

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RRN3	TAF1C	A0A2Y9LE99	A0A2Y9NUS4	RNA polymerase I-specific transcription initiation factor RRN3 isoform X1.	TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X1.	0.887
RRN3	UBTF	A0A2Y9LE99	A0A2Y9MIH9	RNA polymerase I-specific transcription initiation factor RRN3 isoform X1.	Nucleolar transcription factor 1 isoform X1.	0.777
SMARCA4	SMARCB1	A0A2Y9LVE7	A0A2Y9LB33	Transcription activator BRG1 isoform X4.	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.	0.991
SMARCB1	SMARCA4	A0A2Y9LB33	A0A2Y9LVE7	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.	Transcription activator BRG1 isoform X4.	0.991
TAF1B	TAF1C	A0A2Y9LKA2	A0A2Y9NUS4	TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1.	TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X1.	0.401
TAF1C	RRN3	A0A2Y9NUS4	A0A2Y9LE99	TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X1.	RNA polymerase I-specific transcription initiation factor RRN3 isoform X1.	0.887
TAF1C	TAF1B	A0A2Y9NUS4	A0A2Y9LKA2	TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X1.	TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1.	0.401
TAF1C	UBTF	A0A2Y9NUS4	A0A2Y9MIH9	TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X1.	Nucleolar transcription factor 1 isoform X1.	0.697
UBTF	RRN3	A0A2Y9MIH9	A0A2Y9LE99	Nucleolar transcription factor 1 isoform X1.	RNA polymerase I-specific transcription initiation factor RRN3 isoform X1.	0.777
UBTF	TAF1C	A0A2Y9MIH9	A0A2Y9NUS4	Nucleolar transcription factor 1 isoform X1.	TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X1.	0.697