STRINGSTRING
SOX8 SOX8 LRP5 LRP5 NPR3 NPR3 HPSE HPSE TMEM119 TMEM119 NF2 NF2 MN1 MN1 BMP2 BMP2 TNN TNN GATA1 GATA1 ITGAV ITGAV SFRP1 SFRP1 PLXNB1 PLXNB1 EIF2AK2 EIF2AK2 RHOA RHOA LTF LTF ATRAID ATRAID CYR61 CYR61 SMAD3 SMAD3 ABL1 ABL1 CTHRC1 CTHRC1 BCL2 BCL2 GREM1 GREM1 ITGB3 ITGB3 AXIN2 AXIN2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SOX8Transcription factor SOX-8. (463 aa)
LRP5Low-density lipoprotein receptor-related protein; Component of the Wnt-Fzd-LRP5-LRP6 complex that triggers beta-catenin signaling through inducing aggregation of receptor-ligand complexes into ribosome-sized signalsomes. Belongs to the LDLR family. (1622 aa)
NPR3Atrial natriuretic peptide receptor 3. (536 aa)
HPSEHeparanase isoform X1. (542 aa)
TMEM119Transmembrane protein 119. (282 aa)
NF2Merlin isoform X3. (619 aa)
MN1Transcriptional activator MN1. (1314 aa)
BMP2Bone morphogenetic protein 2. (395 aa)
TNNtenascin-N. (1296 aa)
GATA1Erythroid transcription factor isoform X1. (426 aa)
ITGAVIntegrin alpha-V isoform X2; Belongs to the integrin alpha chain family. (1048 aa)
SFRP1Secreted frizzled-related protein 1. (308 aa)
PLXNB1plexin-B1 isoform X1. (2182 aa)
EIF2AK2Interferon-induced, double-stranded RNA-activated protein kinase isoform X1. (539 aa)
RHOATransforming protein RhoA. (193 aa)
LTFLactotransferrin; Belongs to the transferrin family. (710 aa)
ATRAIDAll-trans retinoic acid-induced differentiation factor. (229 aa)
CYR61Protein CYR61. (382 aa)
SMAD3Mothers against decapentaplegic homolog. (425 aa)
ABL1Tyrosine-protein kinase. (1148 aa)
CTHRC1Collagen triple helix repeat-containing protein 1. (285 aa)
BCL2Apoptosis regulator Bcl-2. (233 aa)
GREM1Gremlin. (184 aa)
ITGB3Integrin beta; Belongs to the integrin beta chain family. (789 aa)
AXIN2Axin-2 isoform X1. (843 aa)
Your Current Organism:
Delphinapterus leucas
NCBI taxonomy Id: 9749
Other names: D. leucas, beluga, beluga whale, white whale
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