29 items (Delphinapterus leucas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RPS17	40S ribosomal protein S17. (135 aa)
	RPS28	40S ribosomal protein S28. (69 aa)
	RPL23	60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. (166 aa)
	RPS20	40S ribosomal protein S20. (119 aa)
	EPM2A	Laforin isoform X1. (331 aa)
	LOC111166085	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (115 aa)
	LOC111169107	60S ribosomal protein L36a-like; Belongs to the eukaryotic ribosomal protein eL42 family. (106 aa)
	RPS15	40S ribosomal protein S15 isoform X2; Belongs to the universal ribosomal protein uS19 family. (145 aa)
	RPL14	60S ribosomal protein L14. (211 aa)
	RPL32	60S ribosomal protein L32. (135 aa)
	RPL36AL	60S ribosomal protein L36a-like; Belongs to the eukaryotic ribosomal protein eL42 family. (106 aa)
	LOC111172485	60S ribosomal protein L36a-like; Belongs to the eukaryotic ribosomal protein eL42 family. (106 aa)
	RPS26	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (115 aa)
	RPS29	40S ribosomal protein S29. (56 aa)
	RPL29	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (161 aa)
	LOC111174901	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (118 aa)
	LOC111174211	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (115 aa)
	RPL35	60S ribosomal protein L35. (123 aa)
	LOC111178176	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (115 aa)
	LOC111178109	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (99 aa)
	RPS16	40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (146 aa)
	LOC111179087	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (99 aa)
	LOC111182066	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (157 aa)
	LOC111183294	60S ribosomal protein L36a-like; Belongs to the eukaryotic ribosomal protein eL42 family. (178 aa)
	LOC111182554	60S ribosomal protein L23-like; Belongs to the universal ribosomal protein uL14 family. (140 aa)
	LOC111186164	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (115 aa)
	ICMT	Protein-S-isoprenylcysteine O-methyltransferase. (284 aa)
	RPL31	60S ribosomal protein L31. (125 aa)
	RPL22	60S ribosomal protein L22. (128 aa)

Your Current Organism:

Delphinapterus leucas

NCBI taxonomy Id: 9749
Other names: D. leucas, beluga, beluga whale, white whale

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ICMT	RPL32	A0A2Y9Q5A7	A0A2Y9MMT7	Protein-S-isoprenylcysteine O-methyltransferase.	60S ribosomal protein L32.	0.401
LOC111166085	LOC111169107	A0A2Y9M6T3	A0A2Y9M9D5	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	60S ribosomal protein L36a-like; Belongs to the eukaryotic ribosomal protein eL42 family.	0.594
LOC111166085	LOC111172485	A0A2Y9M6T3	A0A2Y9N0Y8	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	60S ribosomal protein L36a-like; Belongs to the eukaryotic ribosomal protein eL42 family.	0.594
LOC111166085	LOC111182554	A0A2Y9M6T3	A0A2Y9PPI3	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	60S ribosomal protein L23-like; Belongs to the universal ribosomal protein uL14 family.	0.714
LOC111166085	LOC111183294	A0A2Y9M6T3	A0A2Y9PGY1	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	60S ribosomal protein L36a-like; Belongs to the eukaryotic ribosomal protein eL42 family.	0.594
LOC111166085	RPL14	A0A2Y9M6T3	A0A2Y9MK63	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	60S ribosomal protein L14.	0.797
LOC111166085	RPL22	A0A2Y9M6T3	A0A2Y9QGH6	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	60S ribosomal protein L22.	0.676
LOC111166085	RPL23	A0A2Y9M6T3	A0A2Y9LY88	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.	0.714
LOC111166085	RPL29	A0A2Y9M6T3	A0A2Y9N6I7	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	0.802
LOC111166085	RPL31	A0A2Y9M6T3	A0A2Y9QB64	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	60S ribosomal protein L31.	0.799
LOC111166085	RPL32	A0A2Y9M6T3	A0A2Y9MMT7	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	60S ribosomal protein L32.	0.796
LOC111166085	RPL35	A0A2Y9M6T3	A0A2Y9NHQ0	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	60S ribosomal protein L35.	0.791
LOC111166085	RPL36AL	A0A2Y9M6T3	A0A2Y9MZP9	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	60S ribosomal protein L36a-like; Belongs to the eukaryotic ribosomal protein eL42 family.	0.594
LOC111166085	RPS15	A0A2Y9M6T3	A0A2Y9MK56	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	40S ribosomal protein S15 isoform X2; Belongs to the universal ribosomal protein uS19 family.	0.904
LOC111166085	RPS16	A0A2Y9M6T3	A0A2Y9P5N3	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.	0.876
LOC111166085	RPS17	A0A2Y9M6T3	A0A2Y9LKS5	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	40S ribosomal protein S17.	0.766
LOC111166085	RPS20	A0A2Y9M6T3	A0A2Y9LZZ7	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	40S ribosomal protein S20.	0.902
LOC111166085	RPS28	A0A2Y9M6T3	A0A2Y9LTZ0	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	40S ribosomal protein S28.	0.904
LOC111166085	RPS29	A0A2Y9M6T3	A0A2Y9N4M9	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	40S ribosomal protein S29.	0.908
LOC111169107	LOC111166085	A0A2Y9M9D5	A0A2Y9M6T3	60S ribosomal protein L36a-like; Belongs to the eukaryotic ribosomal protein eL42 family.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.594