15 items (Delphinapterus leucas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	STARD5	stAR-related lipid transfer protein 5 isoform X1. (213 aa)
	ABCC3	LOW QUALITY PROTEIN: canalicular multispecific organic anion transporter 2. (1524 aa)
	SLC27A5	Bile acyl-CoA synthetase. (687 aa)
	SLC51A	Organic solute transporter subunit alpha. (347 aa)
	ABCB11	Bile salt export pump isoform X1. (1340 aa)
	SLC10A1	Sodium/bile acid cotransporter. (349 aa)
	NCOA1	Nuclear receptor coactivator. (1441 aa)
	SLC10A2	Ileal sodium/bile acid cotransporter. (358 aa)
	SLCO1A2	Solute carrier organic anion transporter family member. (668 aa)
	RXRA	Retinoic acid receptor RXR-alpha isoform X1. (495 aa)
	SLC51B	LOW QUALITY PROTEIN: organic solute transporter subunit beta. (130 aa)
	LOC111176828	Solute carrier organic anion transporter family member. (685 aa)
	NCOA2	Nuclear receptor coactivator. (1464 aa)
	FABP6	Gastrotropin. (128 aa)
	NR1H4	Bile acid receptor isoform X1. (486 aa)

Your Current Organism:

Delphinapterus leucas

NCBI taxonomy Id: 9749
Other names: D. leucas, beluga, beluga whale, white whale

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABCB11	LOC111176828	A0A2Y9MTB7	A0A2Y9NQ20	Bile salt export pump isoform X1.	Solute carrier organic anion transporter family member.	0.582
ABCB11	NR1H4	A0A2Y9MTB7	A0A2Y9Q991	Bile salt export pump isoform X1.	Bile acid receptor isoform X1.	0.659
ABCB11	SLC10A1	A0A2Y9MTB7	A0A2Y9MU91	Bile salt export pump isoform X1.	Sodium/bile acid cotransporter.	0.611
ABCB11	SLC10A2	A0A2Y9MTB7	A0A2Y9NE49	Bile salt export pump isoform X1.	Ileal sodium/bile acid cotransporter.	0.477
ABCB11	SLC51A	A0A2Y9MTB7	A0A2Y9MQ34	Bile salt export pump isoform X1.	Organic solute transporter subunit alpha.	0.588
ABCB11	SLC51B	A0A2Y9MTB7	A0A2Y9NPI7	Bile salt export pump isoform X1.	LOW QUALITY PROTEIN: organic solute transporter subunit beta.	0.602
ABCC3	LOC111176828	A0A2Y9LYA9	A0A2Y9NQ20	LOW QUALITY PROTEIN: canalicular multispecific organic anion transporter 2.	Solute carrier organic anion transporter family member.	0.507
ABCC3	NR1H4	A0A2Y9LYA9	A0A2Y9Q991	LOW QUALITY PROTEIN: canalicular multispecific organic anion transporter 2.	Bile acid receptor isoform X1.	0.466
ABCC3	SLC10A1	A0A2Y9LYA9	A0A2Y9MU91	LOW QUALITY PROTEIN: canalicular multispecific organic anion transporter 2.	Sodium/bile acid cotransporter.	0.530
ABCC3	SLC51A	A0A2Y9LYA9	A0A2Y9MQ34	LOW QUALITY PROTEIN: canalicular multispecific organic anion transporter 2.	Organic solute transporter subunit alpha.	0.540
ABCC3	SLC51B	A0A2Y9LYA9	A0A2Y9NPI7	LOW QUALITY PROTEIN: canalicular multispecific organic anion transporter 2.	LOW QUALITY PROTEIN: organic solute transporter subunit beta.	0.460
FABP6	NR1H4	A0A2Y9Q5S2	A0A2Y9Q991	Gastrotropin.	Bile acid receptor isoform X1.	0.615
FABP6	SLC10A2	A0A2Y9Q5S2	A0A2Y9NE49	Gastrotropin.	Ileal sodium/bile acid cotransporter.	0.554
FABP6	SLC51B	A0A2Y9Q5S2	A0A2Y9NPI7	Gastrotropin.	LOW QUALITY PROTEIN: organic solute transporter subunit beta.	0.514
LOC111176828	ABCB11	A0A2Y9NQ20	A0A2Y9MTB7	Solute carrier organic anion transporter family member.	Bile salt export pump isoform X1.	0.582
LOC111176828	ABCC3	A0A2Y9NQ20	A0A2Y9LYA9	Solute carrier organic anion transporter family member.	LOW QUALITY PROTEIN: canalicular multispecific organic anion transporter 2.	0.507
LOC111176828	SLC10A1	A0A2Y9NQ20	A0A2Y9MU91	Solute carrier organic anion transporter family member.	Sodium/bile acid cotransporter.	0.674
LOC111176828	SLC51A	A0A2Y9NQ20	A0A2Y9MQ34	Solute carrier organic anion transporter family member.	Organic solute transporter subunit alpha.	0.526
LOC111176828	SLC51B	A0A2Y9NQ20	A0A2Y9NPI7	Solute carrier organic anion transporter family member.	LOW QUALITY PROTEIN: organic solute transporter subunit beta.	0.602
LOC111176828	SLCO1A2	A0A2Y9NQ20	A0A2Y9NH83	Solute carrier organic anion transporter family member.	Solute carrier organic anion transporter family member.	0.907