STRINGSTRING
CSPG4 CSPG4 B3GAT2 B3GAT2 SDC4 SDC4 B3GAT3 B3GAT3 VCAN VCAN AGRN AGRN B3GALT6 B3GALT6 DCN DCN HSPG2 HSPG2 GPC4 GPC4 B3GAT1 B3GAT1 XYLT1 XYLT1 NCAN NCAN GPC3 GPC3 BCAN BCAN XYLT2 XYLT2 B4GALT7 B4GALT7 GPC1 GPC1 BGN BGN SDC3 SDC3 SDC1 SDC1 CSPG5 CSPG5 GPC6 GPC6 GPC5 GPC5 SDC2 SDC2 GPC2 GPC2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CSPG4Chondroitin sulfate proteoglycan 4. (2315 aa)
B3GAT2Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family. (326 aa)
SDC4Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (201 aa)
B3GAT3Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family. (335 aa)
VCANVersican core protein isoform X1. (3392 aa)
AGRNAgrin isoform X1. (2057 aa)
B3GALT6Hexosyltransferase. (324 aa)
DCNDecorin; May affect the rate of fibrils formation. (360 aa)
HSPG2Basement membrane-specific heparan sulfate proteoglycan core protein isoform X1. (4408 aa)
GPC4Glypican-4; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (556 aa)
B3GAT1Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family. (389 aa)
XYLT1Xylosyltransferase 1 isoform X1. (956 aa)
NCANNeurocan core protein isoform X1. (1360 aa)
GPC3Glypican-3; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (580 aa)
BCANBrevican core protein isoform X1. (909 aa)
XYLT2Xylosyltransferase 2 isoform X1. (864 aa)
B4GALT7Beta-1,4-galactosyltransferase 7 isoform X1. (350 aa)
GPC1Glypican-1 isoform X1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (559 aa)
BGNBiglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily. (369 aa)
SDC3Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (442 aa)
SDC1Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (310 aa)
CSPG5Chondroitin sulfate proteoglycan 5 isoform X1. (544 aa)
GPC6Glypican-6; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (555 aa)
GPC5Glypican-5 isoform X1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (570 aa)
SDC2Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (202 aa)
GPC2Glypican-2; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (615 aa)
Your Current Organism:
Delphinapterus leucas
NCBI taxonomy Id: 9749
Other names: D. leucas, beluga, beluga whale, white whale
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