42 items (Delphinapterus leucas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ITGB8	Integrin beta; Belongs to the integrin beta chain family. (767 aa)
	FBN1	Fibrillin-1 isoform X1. (2871 aa)
	FBN2	Fibrillin-2. (2912 aa)
	ITGB3	Integrin beta; Belongs to the integrin beta chain family. (789 aa)
	MFAP2	Microfibrillar-associated protein 2 isoform X1. (183 aa)
	BMP7	Bone morphogenetic protein 7. (431 aa)
	MFAP4	Microfibril-associated glycoprotein 4 isoform X2. (255 aa)
	FBLN2	Fibulin-2 isoform X1. (1217 aa)
	BMP10	Bone morphogenetic protein 10. (423 aa)
	ITGB5	Integrin beta; Belongs to the integrin beta chain family. (800 aa)
	ITGAV	Integrin alpha-V isoform X2; Belongs to the integrin alpha chain family. (1048 aa)
	BMP4	Bone morphogenetic protein 4 isoform X2. (408 aa)
	FN1	Fibronectin isoform X5. (2478 aa)
	ITGB6	Integrin beta; Belongs to the integrin beta chain family. (808 aa)
	GDF7	Growth/differentiation factor 7. (449 aa)
	LTBP1	Latent-transforming growth factor beta-binding protein 1 isoform X1. (1711 aa)
	FBLN5	Fibulin-5 isoform X1. (461 aa)
	EMILIN1	EMILIN-1. (1015 aa)
	TGFB2	Transforming growth factor beta; Belongs to the TGF-beta family. (442 aa)
	ITGA8	Integrin alpha-8 isoform X1; Belongs to the integrin alpha chain family. (1062 aa)
	TGFB3	Transforming growth factor beta-3. (456 aa)
	BMP5	Bone morphogenetic protein 5 isoform X1. (454 aa)
	MFAP5	Microfibrillar-associated protein 5 isoform X1. (169 aa)
	ITGB1	Integrin beta; Belongs to the integrin beta chain family. (798 aa)
	GDF6	Growth/differentiation factor 6. (461 aa)
	TGFB1	Transforming growth factor beta; Belongs to the TGF-beta family. (391 aa)
	BMP6	Bone morphogenetic protein 6. (496 aa)
	LTBP4	Latent-transforming growth factor beta-binding protein 4 isoform X1. (1628 aa)
	ELN	Elastin isoform X1. (748 aa)
	FBLN1	Fibulin-1; Incorporated into fibronectin-containing matrix fibers. May play a role in cell adhesion and migration along protein fibers within the extracellular matrix (ECM). Could be important for certain developmental processes and contribute to the supramolecular organization of ECM architecture, in particular to those of basement membranes. (705 aa)
	VTN	Vitronectin. (565 aa)
	EFEMP1	EGF-containing fibulin-like extracellular matrix protein 1 isoform X1. (498 aa)
	MFAP3L	Microfibrillar-associated protein 3-like. (406 aa)
	GDF5	Growth/differentiation factor 5. (499 aa)
	EMILIN3	EMILIN-3. (766 aa)
	EFEMP2	EGF-containing fibulin-like extracellular matrix protein 2 isoform X1. (523 aa)
	MFAP3	Microfibril-associated glycoprotein 3. (362 aa)
	LTBP3	Latent-transforming growth factor beta-binding protein 3 isoform X1. (1557 aa)
	BMP2	Bone morphogenetic protein 2. (395 aa)
	FBN3	Fibrillin-3 isoform X1. (2823 aa)
	EMILIN2	EMILIN-2. (1070 aa)
	FIBP	Acidic fibroblast growth factor intracellular-binding protein isoform X1. (364 aa)

Your Current Organism:

Delphinapterus leucas

NCBI taxonomy Id: 9749
Other names: D. leucas, beluga, beluga whale, white whale

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BMP10	BMP4	A0A2Y9MIG4	A0A2Y9MV04	Bone morphogenetic protein 10.	Bone morphogenetic protein 4 isoform X2.	0.558
BMP10	BMP5	A0A2Y9MIG4	A0A2Y9NT83	Bone morphogenetic protein 10.	Bone morphogenetic protein 5 isoform X1.	0.563
BMP2	BMP4	A0A2Y9LYV6	A0A2Y9MV04	Bone morphogenetic protein 2.	Bone morphogenetic protein 4 isoform X2.	0.930
BMP2	BMP5	A0A2Y9LYV6	A0A2Y9NT83	Bone morphogenetic protein 2.	Bone morphogenetic protein 5 isoform X1.	0.566
BMP2	BMP6	A0A2Y9LYV6	A0A2Y9P5G7	Bone morphogenetic protein 2.	Bone morphogenetic protein 6.	0.956
BMP2	BMP7	A0A2Y9LYV6	A0A2Y9QCJ3	Bone morphogenetic protein 2.	Bone morphogenetic protein 7.	0.661
BMP2	GDF5	A0A2Y9LYV6	A0A2Y9PZB9	Bone morphogenetic protein 2.	Growth/differentiation factor 5.	0.488
BMP2	ITGB1	A0A2Y9LYV6	A0A2Y9NYK1	Bone morphogenetic protein 2.	Integrin beta; Belongs to the integrin beta chain family.	0.550
BMP2	TGFB1	A0A2Y9LYV6	A0A2Y9P5D5	Bone morphogenetic protein 2.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.438
BMP4	BMP10	A0A2Y9MV04	A0A2Y9MIG4	Bone morphogenetic protein 4 isoform X2.	Bone morphogenetic protein 10.	0.558
BMP4	BMP2	A0A2Y9MV04	A0A2Y9LYV6	Bone morphogenetic protein 4 isoform X2.	Bone morphogenetic protein 2.	0.930
BMP4	BMP5	A0A2Y9MV04	A0A2Y9NT83	Bone morphogenetic protein 4 isoform X2.	Bone morphogenetic protein 5 isoform X1.	0.673
BMP4	BMP6	A0A2Y9MV04	A0A2Y9P5G7	Bone morphogenetic protein 4 isoform X2.	Bone morphogenetic protein 6.	0.965
BMP4	BMP7	A0A2Y9MV04	A0A2Y9QCJ3	Bone morphogenetic protein 4 isoform X2.	Bone morphogenetic protein 7.	0.802
BMP4	GDF5	A0A2Y9MV04	A0A2Y9PZB9	Bone morphogenetic protein 4 isoform X2.	Growth/differentiation factor 5.	0.434
BMP4	ITGB1	A0A2Y9MV04	A0A2Y9NYK1	Bone morphogenetic protein 4 isoform X2.	Integrin beta; Belongs to the integrin beta chain family.	0.414
BMP4	VTN	A0A2Y9MV04	A0A2Y9Q6R9	Bone morphogenetic protein 4 isoform X2.	Vitronectin.	0.443
BMP5	BMP10	A0A2Y9NT83	A0A2Y9MIG4	Bone morphogenetic protein 5 isoform X1.	Bone morphogenetic protein 10.	0.563
BMP5	BMP2	A0A2Y9NT83	A0A2Y9LYV6	Bone morphogenetic protein 5 isoform X1.	Bone morphogenetic protein 2.	0.566
BMP5	BMP4	A0A2Y9NT83	A0A2Y9MV04	Bone morphogenetic protein 5 isoform X1.	Bone morphogenetic protein 4 isoform X2.	0.673