58 items (Delphinapterus leucas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LAMB2	Laminin subunit beta-2 isoform X1. (1812 aa)
	COL1A1	Collagen alpha-1(I) chain. (1463 aa)
	LOC111168166	Collagen alpha-5(VI) chain-like isoform X1. (865 aa)
	LOC111168189	Collagen alpha-5(VI) chain-like. (1419 aa)
	LAMA2	Laminin subunit alpha-2. (3008 aa)
	ITGA2B	Integrin alpha-IIb; Belongs to the integrin alpha chain family. (1034 aa)
	ASPN	Asporin isoform X2. (370 aa)
	LOC111171273	tenascin-X-like. (151 aa)
	ITGB5	Integrin beta; Belongs to the integrin beta chain family. (800 aa)
	COL6A3	Collagen alpha-3(VI) chain isoform X1. (3229 aa)
	ITGAV	Integrin alpha-V isoform X2; Belongs to the integrin alpha chain family. (1048 aa)
	COL3A1	Collagen alpha-1(III) chain. (1464 aa)
	COL5A2	Collagen alpha-2(V) chain isoform X1. (1499 aa)
	BGN	Biglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily. (369 aa)
	FN1	Fibronectin isoform X5. (2478 aa)
	ITGB6	Integrin beta; Belongs to the integrin beta chain family. (808 aa)
	COL2A1	Collagen alpha-1(II) chain. (1487 aa)
	MATN3	Matrilin-3. (482 aa)
	ITGA7	Integrin alpha-7 isoform X1; Belongs to the integrin alpha chain family. (1141 aa)
	MATN1	Cartilage matrix protein. (495 aa)
	COL6A6	Collagen alpha-6(VI) chain isoform X1. (2268 aa)
	COL6A1	Collagen alpha-1(VI) chain. (1027 aa)
	VTN	Vitronectin. (565 aa)
	COL9A3	Collagen alpha-3(IX) chain. (684 aa)
	ITGA2	Integrin alpha-2; Belongs to the integrin alpha chain family. (1179 aa)
	AGRN	Agrin isoform X1. (2057 aa)
	MCMDC2	MCM domain-containing protein 2 isoform X1. (681 aa)
	LAMC1	Laminin subunit gamma-1. (1608 aa)
	VCAN	Versican core protein isoform X1. (3392 aa)
	LRP4	Low-density lipoprotein receptor-related protein 4. (1905 aa)
	LAMB1	Laminin subunit beta-1. (1786 aa)
	MATN4	Matrilin-4 isoform X1. (624 aa)
	COL9A1	Collagen alpha-1(IX) chain isoform X1. (925 aa)
	SERPINE1	Plasminogen activator inhibitor 1; Belongs to the serpin family. (402 aa)
	SPARC	SPARC. (303 aa)
	COL1A2	Collagen alpha-2(I) chain. (1366 aa)
	LOC111182106	Integrin alpha-X-like isoform X1; Belongs to the integrin alpha chain family. (1210 aa)
	ITGB3	Integrin beta; Belongs to the integrin beta chain family. (789 aa)
	DMP1	Dentin matrix acidic phosphoprotein 1. (517 aa)
	ITGB1	Integrin beta; Belongs to the integrin beta chain family. (798 aa)
	TNC	Tenascin isoform X1. (2201 aa)
	MUSK	Muscle, skeletal receptor tyrosine-protein kinase isoform X1. (879 aa)
	ITGA8	Integrin alpha-8 isoform X1; Belongs to the integrin alpha chain family. (1062 aa)
	APP	Amyloid beta A4 protein isoform X1. (767 aa)
	COL6A2	Collagen alpha-2(VI) chain isoform X1. (1027 aa)
	COL5A1	Collagen alpha-1(V) chain isoform X3. (1844 aa)
	COL9A2	Collagen alpha-2(IX) chain isoform X1. (832 aa)
	HAPLN1	Hyaluronan and proteoglycan link protein 1. (354 aa)
	LAMA1	Laminin subunit alpha-1 isoform X1. (3081 aa)
	DCN	Decorin; May affect the rate of fibrils formation. (360 aa)
	HSPG2	Basement membrane-specific heparan sulfate proteoglycan core protein isoform X1. (4408 aa)
	ITGA9	Integrin alpha-9; Belongs to the integrin alpha chain family. (1035 aa)
	COL5A3	Collagen alpha-3(V) chain isoform X1. (1746 aa)
	NCAN	Neurocan core protein isoform X1. (1360 aa)
	COMP	Cartilage oligomeric matrix protein. (756 aa)
	BCAN	Brevican core protein isoform X1. (909 aa)
	TNN	tenascin-N. (1296 aa)
	TNR	tenascin-R isoform X1. (1358 aa)

Your Current Organism:

Delphinapterus leucas

NCBI taxonomy Id: 9749
Other names: D. leucas, beluga, beluga whale, white whale

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGRN	BCAN	A0A2Y9QF76	A0A2Y9M2G2	Agrin isoform X1.	Brevican core protein isoform X1.	0.599
AGRN	BGN	A0A2Y9QF76	A0A2Y9MWU6	Agrin isoform X1.	Biglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily.	0.712
AGRN	DCN	A0A2Y9QF76	A0A2Y9LF23	Agrin isoform X1.	Decorin; May affect the rate of fibrils formation.	0.540
AGRN	HSPG2	A0A2Y9QF76	A0A2Y9LKG0	Agrin isoform X1.	Basement membrane-specific heparan sulfate proteoglycan core protein isoform X1.	0.488
AGRN	ITGA7	A0A2Y9QF76	A0A2Y9N875	Agrin isoform X1.	Integrin alpha-7 isoform X1; Belongs to the integrin alpha chain family.	0.462
AGRN	ITGB1	A0A2Y9QF76	A0A2Y9NYK1	Agrin isoform X1.	Integrin beta; Belongs to the integrin beta chain family.	0.566
AGRN	LRP4	A0A2Y9QF76	A0A2Y9PWR5	Agrin isoform X1.	Low-density lipoprotein receptor-related protein 4.	0.991
AGRN	MUSK	A0A2Y9QF76	A0A2Y9NUA0	Agrin isoform X1.	Muscle, skeletal receptor tyrosine-protein kinase isoform X1.	0.889
AGRN	SPARC	A0A2Y9QF76	A0A2Y9PKX6	Agrin isoform X1.	SPARC.	0.486
AGRN	VCAN	A0A2Y9QF76	A0A2Y9Q0B4	Agrin isoform X1.	Versican core protein isoform X1.	0.410
AGRN	VTN	A0A2Y9QF76	A0A2Y9Q6R9	Agrin isoform X1.	Vitronectin.	0.480
APP	ITGB1	A0A2Y9NJ25	A0A2Y9NYK1	Amyloid beta A4 protein isoform X1.	Integrin beta; Belongs to the integrin beta chain family.	0.515
ASPN	COL1A1	A0A2Y9MH49	A0A2Y9M8V2	Asporin isoform X2.	Collagen alpha-1(I) chain.	0.466
ASPN	COL3A1	A0A2Y9MH49	A0A2Y9MPQ9	Asporin isoform X2.	Collagen alpha-1(III) chain.	0.492
ASPN	DCN	A0A2Y9MH49	A0A2Y9LF23	Asporin isoform X2.	Decorin; May affect the rate of fibrils formation.	0.490
ASPN	HSPG2	A0A2Y9MH49	A0A2Y9LKG0	Asporin isoform X2.	Basement membrane-specific heparan sulfate proteoglycan core protein isoform X1.	0.442
ASPN	MATN3	A0A2Y9MH49	A0A2Y9N5M8	Asporin isoform X2.	Matrilin-3.	0.444
BCAN	AGRN	A0A2Y9M2G2	A0A2Y9QF76	Brevican core protein isoform X1.	Agrin isoform X1.	0.599
BCAN	BGN	A0A2Y9M2G2	A0A2Y9MWU6	Brevican core protein isoform X1.	Biglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily.	0.613
BCAN	DCN	A0A2Y9M2G2	A0A2Y9LF23	Brevican core protein isoform X1.	Decorin; May affect the rate of fibrils formation.	0.678