STRINGSTRING
TCEA3 TCEA3 USP7 USP7 HMGN1 HMGN1 UVSSA UVSSA POLR2C POLR2C TCEA1 TCEA1 KXD1 KXD1 GTF2H5 GTF2H5 COPS3 COPS3 CUL4B CUL4B ERCC6 ERCC6 POLR2E POLR2E GTF2H4 GTF2H4 POLR2B POLR2B POLR2L POLR2L ISY1 ISY1 COPS8 COPS8 COPS7B COPS7B TCEANC TCEANC ZNF830 ZNF830 MNAT1 MNAT1 LOC111175787 LOC111175787 NRDE2 NRDE2 POLR2H POLR2H TCEANC2 TCEANC2 COPS7A COPS7A CUL4A CUL4A LOC111175628 LOC111175628 PPIE PPIE LOC111179762 LOC111179762 ERCC2 ERCC2 GTF2H1 GTF2H1 POLR2K POLR2K COPS2 COPS2 POLR2I POLR2I AQR AQR GPS1 GPS1 POLR2J POLR2J LOC111182289 LOC111182289 COPS6 COPS6 ERCC3 ERCC3 POLR2G POLR2G PRPF19 PRPF19 POLR2D POLR2D DDB1 DDB1 POLR2A POLR2A CDK7 CDK7 COPS5 COPS5 RBX1 RBX1 CCNH CCNH RPS27A RPS27A POLR2F POLR2F EP300 EP300 PPP1R42 PPP1R42 TCEA2 TCEA2 GTF2H3 GTF2H3 ERCC8 ERCC8 XPA XPA COPS4 COPS4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TCEA3Transcription elongation factor A protein 3 isoform X3. (440 aa)
USP7LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 7; Belongs to the peptidase C19 family. (1102 aa)
HMGN1Non-histone chromosomal protein HMG-14. (101 aa)
UVSSAUV-stimulated scaffold protein A. (677 aa)
POLR2CDNA-directed RNA polymerase II subunit RPB3. (275 aa)
TCEA1Transcription elongation factor A protein 1. (301 aa)
KXD1kxDL motif-containing protein 1 isoform X1. (196 aa)
GTF2H5General transcription factor IIH subunit 5. (71 aa)
COPS3COP9 signalosome complex subunit 3 isoform X1. (423 aa)
CUL4Bcullin-4B isoform X1; Belongs to the cullin family. (904 aa)
ERCC6DNA excision repair protein ERCC-6. (1485 aa)
POLR2EDNA-directed RNA polymerases I, II, and III subunit RPABC1. (210 aa)
GTF2H4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (463 aa)
POLR2BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
POLR2LDNA-directed RNA polymerases I, II, and III subunit RPABC5. (67 aa)
ISY1pre-mRNA-splicing factor ISY1 homolog. (283 aa)
COPS8COP9 signalosome complex subunit 8. (209 aa)
COPS7BCOP9 signalosome complex subunit 7b. (264 aa)
TCEANCTranscription elongation factor A N-terminal and central domain-containing protein. (352 aa)
ZNF830Zinc finger protein 830. (380 aa)
MNAT1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (309 aa)
LOC111175787LOW QUALITY PROTEIN: cullin-4B-like; Belongs to the cullin family. (891 aa)
NRDE2Protein NRDE2 homolog isoform X1. (1165 aa)
POLR2HDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
TCEANC2Transcription elongation factor A N-terminal and central domain-containing protein 2. (208 aa)
COPS7ACOP9 signalosome complex subunit 7a isoform X1. (283 aa)
CUL4Acullin-4A; Belongs to the cullin family. (761 aa)
LOC111175628Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (206 aa)
PPIEPeptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (304 aa)
LOC111179762Non-histone chromosomal protein HMG-14-like. (102 aa)
ERCC2TFIIH basal transcription factor complex helicase XPD subunit isoform X1. (823 aa)
GTF2H1General transcription factor IIH subunit 1. (548 aa)
POLR2KDNA-directed RNA polymerases I, II, and III subunit RPABC4. (58 aa)
COPS2COP9 signalosome complex subunit 2 isoform X1. (450 aa)
POLR2IDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (132 aa)
AQRRNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing. (1485 aa)
GPS1COP9 signalosome complex subunit 1 isoform X4. (599 aa)
POLR2JDNA-directed RNA polymerase II subunit RPB11-a. (117 aa)
LOC111182289LOW QUALITY PROTEIN: uroplakin-3b-like protein 1. (253 aa)
COPS6COP9 signalosome complex subunit 6 isoform X1. (333 aa)
ERCC3TFIIH basal transcription factor complex helicase XPB subunit isoform X1. (782 aa)
POLR2GDNA-directed RNA polymerase II subunit RPB7 isoform X1. (172 aa)
PRPF19pre-mRNA-processing factor 19. (504 aa)
POLR2DDNA-directed RNA polymerase II subunit RPB4. (142 aa)
DDB1DNA damage-binding protein 1. (1140 aa)
POLR2ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1970 aa)
CDK7Cyclin-dependent kinase 7 isoform X1; Belongs to the protein kinase superfamily. (346 aa)
COPS5COP9 signalosome complex subunit 5 isoform X1. (334 aa)
RBX1E3 ubiquitin-protein ligase RBX1. (108 aa)
CCNHcyclin-H; Belongs to the cyclin family. (323 aa)
RPS27Aubiquitin-40S ribosomal protein S27a. (156 aa)
POLR2FDNA-directed RNA polymerases I, II, and III subunit RPABC2 isoform X1. (127 aa)
EP300Histone acetyltransferase p300. (2420 aa)
PPP1R42Protein phosphatase 1 regulatory subunit 42 isoform X1. (353 aa)
TCEA2Transcription elongation factor A protein 2 isoform X2. (356 aa)
GTF2H3General transcription factor IIH subunit 3 isoform X1. (313 aa)
ERCC8DNA excision repair protein ERCC-8 isoform X1. (396 aa)
XPADNA repair protein complementing XP-A cells. (273 aa)
COPS4COP9 signalosome complex subunit 4 isoform X1. (406 aa)
Your Current Organism:
Delphinapterus leucas
NCBI taxonomy Id: 9749
Other names: D. leucas, beluga, beluga whale, white whale
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