23 items (Delphinapterus leucas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CD40	Tumor necrosis factor receptor superfamily member 5 isoform X1. (284 aa)
	TNFRSF1A	Tumor necrosis factor receptor superfamily member 1A. (445 aa)
	NGFR	Tumor necrosis factor receptor superfamily member 16. (427 aa)
	TNFRSF11B	Tumor necrosis factor receptor superfamily member 11B; Acts as decoy receptor for TNFSF11/RANKL and thereby neutralizes its function in osteoclastogenesis. (401 aa)
	EDA2R	Tumor necrosis factor receptor superfamily member 27 isoform X1. (364 aa)
	TNFRSF9	Tumor necrosis factor receptor superfamily member 9. (260 aa)
	LOC111185435	Tumor necrosis factor receptor superfamily member 10A-like isoform X1. (454 aa)
	LOC111185436	Tumor necrosis factor receptor superfamily member 10B-like isoform X1. (456 aa)
	TNFRSF1B	Tumor necrosis factor receptor superfamily member 1B. (454 aa)
	TNFRSF18	LOW QUALITY PROTEIN: tumor necrosis factor receptor superfamily member 18. (231 aa)
	TNFRSF4	Tumor necrosis factor receptor superfamily member 4. (278 aa)
	TNFRSF8	Tumor necrosis factor receptor superfamily member 8. (598 aa)
	TNFRSF6B	Tumor necrosis factor receptor superfamily member 6B. (296 aa)
	TNFRSF25	Tumor necrosis factor receptor superfamily member 25 isoform X1. (419 aa)
	USH2A	Usherin. (5204 aa)
	CD27	CD27 antigen isoform X1. (251 aa)
	LTBR	Tumor necrosis factor receptor superfamily member 3. (421 aa)
	TNFRSF19	Tumor necrosis factor receptor superfamily member 19 isoform X1. (425 aa)
	FAS	Tumor necrosis factor receptor superfamily member 6 isoform X1. (334 aa)
	TNFRSF11A	Tumor necrosis factor receptor superfamily member 11A isoform X1. (551 aa)
	TNFRSF21	Tumor necrosis factor receptor superfamily member 21 isoform X3. (701 aa)
	RELT	Tumor necrosis factor receptor superfamily member 19L isoform X1. (487 aa)
	LOC111184077	Tumor necrosis factor receptor superfamily member 26-like. (308 aa)

Your Current Organism:

Delphinapterus leucas

NCBI taxonomy Id: 9749
Other names: D. leucas, beluga, beluga whale, white whale

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CD27	CD40	A0A2Y9NGB6	A0A2Y9MFP5	CD27 antigen isoform X1.	Tumor necrosis factor receptor superfamily member 5 isoform X1.	0.525
CD27	FAS	A0A2Y9NGB6	A0A2Y9MT08	CD27 antigen isoform X1.	Tumor necrosis factor receptor superfamily member 6 isoform X1.	0.575
CD40	CD27	A0A2Y9MFP5	A0A2Y9NGB6	Tumor necrosis factor receptor superfamily member 5 isoform X1.	CD27 antigen isoform X1.	0.525
CD40	FAS	A0A2Y9MFP5	A0A2Y9MT08	Tumor necrosis factor receptor superfamily member 5 isoform X1.	Tumor necrosis factor receptor superfamily member 6 isoform X1.	0.415
CD40	TNFRSF11A	A0A2Y9MFP5	A0A2Y9P461	Tumor necrosis factor receptor superfamily member 5 isoform X1.	Tumor necrosis factor receptor superfamily member 11A isoform X1.	0.486
CD40	TNFRSF1A	A0A2Y9MFP5	A0A2Y9NUB7	Tumor necrosis factor receptor superfamily member 5 isoform X1.	Tumor necrosis factor receptor superfamily member 1A.	0.535
FAS	CD27	A0A2Y9MT08	A0A2Y9NGB6	Tumor necrosis factor receptor superfamily member 6 isoform X1.	CD27 antigen isoform X1.	0.575
FAS	CD40	A0A2Y9MT08	A0A2Y9MFP5	Tumor necrosis factor receptor superfamily member 6 isoform X1.	Tumor necrosis factor receptor superfamily member 5 isoform X1.	0.415
FAS	LOC111184077	A0A2Y9MT08	A0A2Y9PXW8	Tumor necrosis factor receptor superfamily member 6 isoform X1.	Tumor necrosis factor receptor superfamily member 26-like.	0.517
FAS	LOC111185435	A0A2Y9MT08	A0A2Y9Q5N6	Tumor necrosis factor receptor superfamily member 6 isoform X1.	Tumor necrosis factor receptor superfamily member 10A-like isoform X1.	0.560
FAS	LOC111185436	A0A2Y9MT08	A0A2Y9Q5P0	Tumor necrosis factor receptor superfamily member 6 isoform X1.	Tumor necrosis factor receptor superfamily member 10B-like isoform X1.	0.560
FAS	TNFRSF1A	A0A2Y9MT08	A0A2Y9NUB7	Tumor necrosis factor receptor superfamily member 6 isoform X1.	Tumor necrosis factor receptor superfamily member 1A.	0.954
LOC111184077	FAS	A0A2Y9PXW8	A0A2Y9MT08	Tumor necrosis factor receptor superfamily member 26-like.	Tumor necrosis factor receptor superfamily member 6 isoform X1.	0.517
LOC111184077	LOC111185435	A0A2Y9PXW8	A0A2Y9Q5N6	Tumor necrosis factor receptor superfamily member 26-like.	Tumor necrosis factor receptor superfamily member 10A-like isoform X1.	0.651
LOC111184077	LOC111185436	A0A2Y9PXW8	A0A2Y9Q5P0	Tumor necrosis factor receptor superfamily member 26-like.	Tumor necrosis factor receptor superfamily member 10B-like isoform X1.	0.651
LOC111185435	FAS	A0A2Y9Q5N6	A0A2Y9MT08	Tumor necrosis factor receptor superfamily member 10A-like isoform X1.	Tumor necrosis factor receptor superfamily member 6 isoform X1.	0.560
LOC111185435	LOC111184077	A0A2Y9Q5N6	A0A2Y9PXW8	Tumor necrosis factor receptor superfamily member 10A-like isoform X1.	Tumor necrosis factor receptor superfamily member 26-like.	0.651
LOC111185435	LOC111185436	A0A2Y9Q5N6	A0A2Y9Q5P0	Tumor necrosis factor receptor superfamily member 10A-like isoform X1.	Tumor necrosis factor receptor superfamily member 10B-like isoform X1.	0.901
LOC111185435	TNFRSF1A	A0A2Y9Q5N6	A0A2Y9NUB7	Tumor necrosis factor receptor superfamily member 10A-like isoform X1.	Tumor necrosis factor receptor superfamily member 1A.	0.477
LOC111185436	FAS	A0A2Y9Q5P0	A0A2Y9MT08	Tumor necrosis factor receptor superfamily member 10B-like isoform X1.	Tumor necrosis factor receptor superfamily member 6 isoform X1.	0.560