STRINGSTRING
YARS1 YARS1 MARS2 MARS2 AIMP1 AIMP1 RARS1 RARS1 LARS1 LARS1 EPRS1 EPRS1 IARS2 IARS2 IARS1 IARS1 EEF1E1 EEF1E1 LARS2 LARS2 QARS1 QARS1 RARS2 RARS2 KARS1 KARS1 AIMP2 AIMP2 MARS1 MARS1 PARS2 PARS2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
YARS1Tyrosine--tRNA ligase. (528 aa)
MARS2methionine--tRNA ligase, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family. (593 aa)
AIMP1Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X1. (305 aa)
RARS1arginine--tRNA ligase, cytoplasmic isoform X1; Belongs to the class-I aminoacyl-tRNA synthetase family. (660 aa)
LARS1leucine--tRNA ligase, cytoplasmic isoform X1; Belongs to the class-I aminoacyl-tRNA synthetase family. (1184 aa)
EPRS1Bifunctional glutamate/proline--tRNA ligase. (1512 aa)
IARS2isoleucine--tRNA ligase, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family. (1001 aa)
IARS1isoleucine--tRNA ligase, cytoplasmic isoform X2; Belongs to the class-I aminoacyl-tRNA synthetase family. (1262 aa)
EEF1E1Eukaryotic translation elongation factor 1 epsilon-1 isoform X1. (174 aa)
LARS2Probable leucine--tRNA ligase, mitochondrial isoform X1; Belongs to the class-I aminoacyl-tRNA synthetase family. (903 aa)
QARS1glutamine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (775 aa)
RARS2Probable arginine--tRNA ligase, mitochondrial isoform X1; Belongs to the class-I aminoacyl-tRNA synthetase family. (578 aa)
KARS1Lysine--tRNA ligase. (625 aa)
AIMP2Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 isoform X1. (320 aa)
MARS1methionine--tRNA ligase, cytoplasmic isoform X2; Belongs to the class-I aminoacyl-tRNA synthetase family. (900 aa)
PARS2Probable proline--tRNA ligase, mitochondrial. (475 aa)
Your Current Organism:
Physeter catodon
NCBI taxonomy Id: 9755
Other names: P. catodon, Physeter macrocephalus, sperm whale
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