(12 nodes) Mixed, incl. Rab GDP-dissociation inhibitor activity, and Establishment of protein localization to endoplasmic reticulum membrane network (Physeter catodon)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSPCTP00005002566	annotation not available (190 aa)
	RAB18	Ras-related protein Rab-18. (206 aa)
	RAB3GAP2	Rab3 GTPase-activating protein non-catalytic subunit isoform X1. (1392 aa)
	RAB3GAP1	Rab3 GTPase-activating protein catalytic subunit isoform X1. (982 aa)
	GDI2	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. (445 aa)
	RAB1A	Ras-related protein Rab-1A. (205 aa)
	ENSPCTP00005011209	annotation not available (374 aa)
	ENSPCTP00005015276	annotation not available (187 aa)
	RAB1B	Ras-related protein Rab-1B. (201 aa)
	GDI1	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. (432 aa)
	RAB13	Ras-related protein Rab-13. (203 aa)
	TBC1D20	TBC1 domain family member 20. (379 aa)

Your Current Organism:

Physeter catodon

NCBI taxonomy Id: 9755
Other names: P. catodon, Physeter macrocephalus, sperm whale

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPCTP00005002566	ENSPCTP00005011209	ENSPCTP00005002566	ENSPCTP00005011209	annotation not available	annotation not available	0.744
ENSPCTP00005002566	ENSPCTP00005015276	ENSPCTP00005002566	ENSPCTP00005015276	annotation not available	annotation not available	0.416
ENSPCTP00005002566	GDI1	ENSPCTP00005002566	ENSPCTP00005020148	annotation not available	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	0.755
ENSPCTP00005002566	GDI2	ENSPCTP00005002566	ENSPCTP00005006693	annotation not available	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	0.744
ENSPCTP00005002566	RAB18	ENSPCTP00005002566	ENSPCTP00005004105	annotation not available	Ras-related protein Rab-18.	0.494
ENSPCTP00005002566	RAB1A	ENSPCTP00005002566	ENSPCTP00005011068	annotation not available	Ras-related protein Rab-1A.	0.525
ENSPCTP00005002566	RAB1B	ENSPCTP00005002566	ENSPCTP00005018385	annotation not available	Ras-related protein Rab-1B.	0.472
ENSPCTP00005002566	RAB3GAP2	ENSPCTP00005002566	ENSPCTP00005004163	annotation not available	Rab3 GTPase-activating protein non-catalytic subunit isoform X1.	0.452
ENSPCTP00005011209	ENSPCTP00005002566	ENSPCTP00005011209	ENSPCTP00005002566	annotation not available	annotation not available	0.744
ENSPCTP00005011209	ENSPCTP00005015276	ENSPCTP00005011209	ENSPCTP00005015276	annotation not available	annotation not available	0.764
ENSPCTP00005011209	RAB13	ENSPCTP00005011209	ENSPCTP00005021817	annotation not available	Ras-related protein Rab-13.	0.685
ENSPCTP00005011209	RAB18	ENSPCTP00005011209	ENSPCTP00005004105	annotation not available	Ras-related protein Rab-18.	0.684
ENSPCTP00005011209	RAB1A	ENSPCTP00005011209	ENSPCTP00005011068	annotation not available	Ras-related protein Rab-1A.	0.837
ENSPCTP00005011209	RAB1B	ENSPCTP00005011209	ENSPCTP00005018385	annotation not available	Ras-related protein Rab-1B.	0.837
ENSPCTP00005011209	RAB3GAP1	ENSPCTP00005011209	ENSPCTP00005004947	annotation not available	Rab3 GTPase-activating protein catalytic subunit isoform X1.	0.709
ENSPCTP00005011209	RAB3GAP2	ENSPCTP00005011209	ENSPCTP00005004163	annotation not available	Rab3 GTPase-activating protein non-catalytic subunit isoform X1.	0.726
ENSPCTP00005011209	TBC1D20	ENSPCTP00005011209	ENSPCTP00005029402	annotation not available	TBC1 domain family member 20.	0.460
ENSPCTP00005015276	ENSPCTP00005002566	ENSPCTP00005015276	ENSPCTP00005002566	annotation not available	annotation not available	0.416
ENSPCTP00005015276	ENSPCTP00005011209	ENSPCTP00005015276	ENSPCTP00005011209	annotation not available	annotation not available	0.764
ENSPCTP00005015276	GDI1	ENSPCTP00005015276	ENSPCTP00005020148	annotation not available	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	0.764