STRINGSTRING
LOC112066681 LOC112066681 PIK3R4 PIK3R4 BECN2 BECN2 RUBCN RUBCN ULK2 ULK2 PIK3C3 PIK3C3 RB1CC1 RB1CC1 WIPI1 WIPI1 BECN1 BECN1 UVRAG UVRAG ATG9B ATG9B ATG101 ATG101 ATG2A ATG2A WIPI2 WIPI2 AMBRA1 AMBRA1 LOC102992551 LOC102992551 ULK1 ULK1 ATG16L2 ATG16L2 ATG2B ATG2B NRBF2 NRBF2 ULK3 ULK3 ATG14 ATG14
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC112066681Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily. (888 aa)
PIK3R4Phosphoinositide 3-kinase regulatory subunit 4 isoform X1. (1359 aa)
BECN2Beclin-2. (353 aa)
RUBCNRun domain Beclin-1-interacting and cysteine-rich domain-containing protein isoform X2. (996 aa)
ULK2Serine/threonine-protein kinase ULK2 isoform X5. (1027 aa)
PIK3C3Phosphatidylinositol 3-kinase catalytic subunit type 3. (887 aa)
RB1CC1RB1-inducible coiled-coil protein 1 isoform X1. (1589 aa)
WIPI1WD repeat domain phosphoinositide-interacting protein 1 isoform X1. (364 aa)
BECN1Beclin-1 isoform X1. (473 aa)
UVRAGUV radiation resistance-associated gene protein isoform X1. (699 aa)
ATG9BAutophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (843 aa)
ATG101Autophagy-related protein 101. (218 aa)
ATG2AAutophagy-related protein 2 homolog A isoform X2. (1925 aa)
WIPI2WD repeat domain phosphoinositide-interacting protein 2 isoform X2. (454 aa)
AMBRA1Activating molecule in BECN1-regulated autophagy protein 1. (1067 aa)
LOC102992551Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily. (551 aa)
ULK1Serine/threonine-protein kinase; Serine/threonine-protein kinase involved in autophagy in response to starvation; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. APG1/unc-51/ULK1 subfamily. (1155 aa)
ATG16L2Autophagy-related protein 16-2 isoform X1. (620 aa)
ATG2BAutophagy-related protein 2 homolog B isoform X4. (2078 aa)
NRBF2Nuclear receptor-binding factor 2 isoform X1. (288 aa)
ULK3Serine/threonine-protein kinase ULK3 isoform X4; Belongs to the protein kinase superfamily. (472 aa)
ATG14Beclin 1-associated autophagy-related key regulator. (510 aa)
Your Current Organism:
Physeter catodon
NCBI taxonomy Id: 9755
Other names: P. catodon, Physeter macrocephalus, sperm whale
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