6 items (Physeter catodon) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LXN	Latexin isoform X4. (222 aa)
	LNPK	Endoplasmic reticulum junction formation protein lunapark isoform X1. (429 aa)
	DACH1	Dachshund homolog 1. (761 aa)
	ITFG1	T-cell immunomodulatory protein isoform X2. (610 aa)
	TMEM179B	Transmembrane protein 179B. (224 aa)
	TM7SF3	Transmembrane 7 superfamily member 3. (537 aa)

Your Current Organism:

Physeter catodon

NCBI taxonomy Id: 9755
Other names: P. catodon, Physeter macrocephalus, sperm whale

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DACH1	LXN	ENSPCTP00005010563	ENSPCTP00005005726	Dachshund homolog 1.	Latexin isoform X4.	0.485
DACH1	TM7SF3	ENSPCTP00005010563	ENSPCTP00005027703	Dachshund homolog 1.	Transmembrane 7 superfamily member 3.	0.698
ITFG1	LNPK	ENSPCTP00005013099	ENSPCTP00005010226	T-cell immunomodulatory protein isoform X2.	Endoplasmic reticulum junction formation protein lunapark isoform X1.	0.529
ITFG1	TM7SF3	ENSPCTP00005013099	ENSPCTP00005027703	T-cell immunomodulatory protein isoform X2.	Transmembrane 7 superfamily member 3.	0.569
ITFG1	TMEM179B	ENSPCTP00005013099	ENSPCTP00005023601	T-cell immunomodulatory protein isoform X2.	Transmembrane protein 179B.	0.603
LNPK	ITFG1	ENSPCTP00005010226	ENSPCTP00005013099	Endoplasmic reticulum junction formation protein lunapark isoform X1.	T-cell immunomodulatory protein isoform X2.	0.529
LNPK	TM7SF3	ENSPCTP00005010226	ENSPCTP00005027703	Endoplasmic reticulum junction formation protein lunapark isoform X1.	Transmembrane 7 superfamily member 3.	0.585
LNPK	TMEM179B	ENSPCTP00005010226	ENSPCTP00005023601	Endoplasmic reticulum junction formation protein lunapark isoform X1.	Transmembrane protein 179B.	0.614
LXN	DACH1	ENSPCTP00005005726	ENSPCTP00005010563	Latexin isoform X4.	Dachshund homolog 1.	0.485
LXN	TM7SF3	ENSPCTP00005005726	ENSPCTP00005027703	Latexin isoform X4.	Transmembrane 7 superfamily member 3.	0.759
TM7SF3	DACH1	ENSPCTP00005027703	ENSPCTP00005010563	Transmembrane 7 superfamily member 3.	Dachshund homolog 1.	0.698
TM7SF3	ITFG1	ENSPCTP00005027703	ENSPCTP00005013099	Transmembrane 7 superfamily member 3.	T-cell immunomodulatory protein isoform X2.	0.569
TM7SF3	LNPK	ENSPCTP00005027703	ENSPCTP00005010226	Transmembrane 7 superfamily member 3.	Endoplasmic reticulum junction formation protein lunapark isoform X1.	0.585
TM7SF3	LXN	ENSPCTP00005027703	ENSPCTP00005005726	Transmembrane 7 superfamily member 3.	Latexin isoform X4.	0.759
TMEM179B	ITFG1	ENSPCTP00005023601	ENSPCTP00005013099	Transmembrane protein 179B.	T-cell immunomodulatory protein isoform X2.	0.603
TMEM179B	LNPK	ENSPCTP00005023601	ENSPCTP00005010226	Transmembrane protein 179B.	Endoplasmic reticulum junction formation protein lunapark isoform X1.	0.614