STRINGSTRING
ENSPCTP00005000030 ENSPCTP00005000030 LOC114484084 LOC114484084 U2SURP U2SURP SNRPG SNRPG SF3B1 SF3B1 ZMAT2 ZMAT2 RNPC3 RNPC3 RBM22 RBM22 SNRNP40 SNRNP40 ZCCHC17 ZCCHC17 BCAS2 BCAS2 PPIE PPIE ENSPCTP00005002114 ENSPCTP00005002114 SF3B5 SF3B5 SMU1 SMU1 PPIL3 PPIL3 LOC112064003 LOC112064003 DHX9 DHX9 LOC112061978 LOC112061978 ENSPCTP00005003400 ENSPCTP00005003400 TCERG1 TCERG1 SLU7 SLU7 SNRPG-2 SNRPG-2 PLRG1 PLRG1 ENSPCTP00005004743 ENSPCTP00005004743 SNIP1 SNIP1 ENSPCTP00005005145 ENSPCTP00005005145 WDR53 WDR53 SF3A3 SF3A3 PPIG PPIG LOC102989765 LOC102989765 ENSPCTP00005006321 ENSPCTP00005006321 RBM17 RBM17 CTNNBL1 CTNNBL1 USP39 USP39 ENSPCTP00005007052 ENSPCTP00005007052 SNRPB SNRPB SF3A1 SF3A1 WBP4 WBP4 SNRPF SNRPF GPKOW GPKOW SNRPA SNRPA ZMAT5 ZMAT5 LOC102973429 LOC102973429 CWF19L2 CWF19L2 CWC25 CWC25 WDR25 WDR25 PQBP1 PQBP1 ENSPCTP00005009370 ENSPCTP00005009370 PRPF31 PRPF31 ENSPCTP00005009576 ENSPCTP00005009576 LOC102990906 LOC102990906 LOC114487665 LOC114487665 ENSPCTP00005009879 ENSPCTP00005009879 SRRM1 SRRM1 CDC5L CDC5L ENSPCTP00005010337 ENSPCTP00005010337 TFIP11 TFIP11 SNRNP200 SNRNP200 SNRPB2 SNRPB2 ENSPCTP00005011841 ENSPCTP00005011841 ENSPCTP00005012098 ENSPCTP00005012098 ENSPCTP00005012229 ENSPCTP00005012229 SNRPN SNRPN ENSPCTP00005012545 ENSPCTP00005012545 ENSPCTP00005012574 ENSPCTP00005012574 SNRNP70 SNRNP70 PRPF38A PRPF38A DDX23 DDX23 SRRM3 SRRM3 PRPF3 PRPF3 DHX16 DHX16 ENSPCTP00005013941 ENSPCTP00005013941 SF3B3 SF3B3 RBM10 RBM10 ENSPCTP00005014461 ENSPCTP00005014461 CDC40 CDC40 RBM42 RBM42 WBP11 WBP11 XAB2 XAB2 PRPF4 PRPF4 CWC22 CWC22 PRPF18 PRPF18 DQX1 DQX1 ENSPCTP00005015429 ENSPCTP00005015429 SF3B4 SF3B4 CRNKL1 CRNKL1 DDX46 DDX46 DHX15 DHX15 ENSPCTP00005016439 ENSPCTP00005016439 CWC27 CWC27 PHF5A PHF5A CWC15 CWC15 PPWD1 PPWD1 DHX8 DHX8 PUF60 PUF60 ENSPCTP00005017426 ENSPCTP00005017426 DDX42 DDX42 SNRNP35 SNRNP35 SUGP1 SUGP1 PRPF8 PRPF8 ENSPCTP00005018382 ENSPCTP00005018382 ENSPCTP00005018712 ENSPCTP00005018712 SNRPD2 SNRPD2 PPIL2 PPIL2 LOC102987342 LOC102987342 DAW1 DAW1 ENSPCTP00005019744 ENSPCTP00005019744 LOC102995785 LOC102995785 SMNDC1 SMNDC1 ENSPCTP00005020616 ENSPCTP00005020616 BUD31 BUD31 ENSPCTP00005021370 ENSPCTP00005021370 LOC102981475 LOC102981475 CHERP CHERP ENSPCTP00005021724 ENSPCTP00005021724 SNRNP48 SNRNP48 ENSPCTP00005021776 ENSPCTP00005021776 TXNL4A TXNL4A RBMX2 RBMX2 GCFC2 GCFC2 WDR70 WDR70 YJU2 YJU2 SNRPC SNRPC FUBP1 FUBP1 LOC114485130 LOC114485130 ISY1 ISY1 PRPF6 PRPF6 SNRPD3 SNRPD3 LOC114483901 LOC114483901 SNRPA1 SNRPA1 ZCRB1 ZCRB1 SF3B6 SF3B6 DHX35 DHX35 BUD13 BUD13 DHX38 DHX38 TXNL4B TXNL4B EFTUD2 EFTUD2 SNRPE SNRPE ENSPCTP00005026871 ENSPCTP00005026871 LOC102994985 LOC102994985 IK IK LOC114483883 LOC114483883 YBX1 YBX1 PPIL1 PPIL1 PPIH PPIH SRRM2 SRRM2 UBL5 UBL5 MFAP1 MFAP1 ENSPCTP00005029299 ENSPCTP00005029299 SNRPD1 SNRPD1 ENSPCTP00005029835 ENSPCTP00005029835 AQR AQR RNF113A RNF113A ENSPCTP00005030204 ENSPCTP00005030204 PRPF19 PRPF19 ENSPCTP00005031714 ENSPCTP00005031714 SART1 SART1 SF3B2 SF3B2 SNW1 SNW1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSPCTP00005000030annotation not available (98 aa)
LOC114484084Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (92 aa)
U2SURPU2 snRNP-associated SURP motif-containing protein isoform X1. (1033 aa)
SNRPGSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (74 aa)
SF3B1Splicing factor 3B subunit 1 isoform X1. (1304 aa)
ZMAT2Zinc finger matrin-type protein 2. (199 aa)
RNPC3RNA-binding region-containing protein 3 isoform X1. (517 aa)
RBM22pre-mRNA-splicing factor RBM22. (421 aa)
SNRNP40U5 small nuclear ribonucleoprotein 40 kDa protein. (358 aa)
ZCCHC17Nucleolar protein of 40 kDa. (230 aa)
BCAS2pre-mRNA-splicing factor SPF27. (240 aa)
PPIEPeptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (316 aa)
ENSPCTP00005002114annotation not available (166 aa)
SF3B5Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
SMU1WD40 repeat-containing protein SMU1. (513 aa)
PPIL3Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (161 aa)
LOC112064003PHD finger-like domain-containing protein 5A. (110 aa)
DHX9ATP-dependent RNA helicase A isoform X1. (1259 aa)
LOC112061978Ubiquitin-like protein 5. (71 aa)
ENSPCTP00005003400annotation not available (115 aa)
TCERG1Transcription elongation regulator 1 isoform X5. (1091 aa)
SLU7pre-mRNA-splicing factor SLU7 isoform X2. (631 aa)
SNRPG-2Small nuclear ribonucleoprotein G. (70 aa)
PLRG1Pleiotropic regulator 1 isoform X1. (513 aa)
ENSPCTP00005004743annotation not available (65 aa)
SNIP1Smad nuclear-interacting protein 1. (398 aa)
ENSPCTP00005005145annotation not available (108 aa)
WDR53WD repeat-containing protein 53 isoform X2. (373 aa)
SF3A3Splicing factor 3A subunit 3. (453 aa)
PPIGPeptidyl-prolyl cis-trans isomerase G. (750 aa)
LOC102989765Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (92 aa)
ENSPCTP00005006321annotation not available (55 aa)
RBM17Splicing factor 45. (401 aa)
CTNNBL1Beta-catenin-like protein 1 isoform X1. (577 aa)
USP39U4/U6.U5 tri-snRNP-associated protein 2 isoform X1. (565 aa)
ENSPCTP00005007052annotation not available (188 aa)
SNRPBSmall nuclear ribonucleoprotein-associated protein. (231 aa)
SF3A1Splicing factor 3A subunit 1. (793 aa)
WBP4WW domain-binding protein 4. (377 aa)
SNRPFSmall nuclear ribonucleoprotein F. (86 aa)
GPKOWG-patch domain and KOW motifs-containing protein. (477 aa)
SNRPAU1 small nuclear ribonucleoprotein A isoform X1. (282 aa)
ZMAT5Zinc finger matrin-type protein 5 isoform X2. (170 aa)
LOC102973429Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. (123 aa)
CWF19L2CWF19-like protein 2 isoform X1. (846 aa)
CWC25pre-mRNA-splicing factor CWC25 homolog. (425 aa)
WDR25WD repeat-containing protein 25. (270 aa)
PQBP1Polyglutamine-binding protein 1. (265 aa)
ENSPCTP00005009370annotation not available (55 aa)
PRPF31U4/U6 small nuclear ribonucleoprotein Prp31 isoform X2. (499 aa)
ENSPCTP00005009576annotation not available (228 aa)
LOC102990906pre-mRNA-splicing factor SYF2. (232 aa)
LOC114487665pre-mRNA-processing-splicing factor 8. (322 aa)
ENSPCTP00005009879annotation not available (174 aa)
SRRM1Serine/arginine repetitive matrix protein 1 isoform X9. (913 aa)
CDC5LCell division cycle 5-like protein. (802 aa)
ENSPCTP00005010337annotation not available (120 aa)
TFIP11Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Intron turnover seems to proceed through reactions in two lariat-intron associated complexes termed Intron Large (IL) and Intron Small (IS). In cooperation with DHX15 seems to mediate the transition of the U2, U5 and U6 snRNP- containing IL complex to the snRNP-free IS complex leading to efficient debranching and turnover of excised introns. May play a role in the differentiation of ameloblasts and odontoblasts or in the forming of the enamel extrac [...] (784 aa)
SNRNP200U5 small nuclear ribonucleoprotein 200 kDa helicase. (1406 aa)
SNRPB2U2 small nuclear ribonucleoprotein B'. (225 aa)
ENSPCTP00005011841annotation not available (110 aa)
ENSPCTP00005012098annotation not available (54 aa)
ENSPCTP00005012229annotation not available (224 aa)
SNRPNSmall nuclear ribonucleoprotein-associated protein. (244 aa)
ENSPCTP00005012545annotation not available (72 aa)
ENSPCTP00005012574annotation not available (111 aa)
SNRNP70U1 small nuclear ribonucleoprotein 70 kDa isoform X1. (439 aa)
PRPF38Apre-mRNA-splicing factor 38A. (312 aa)
DDX23Probable ATP-dependent RNA helicase DDX23. (818 aa)
SRRM3Serine/arginine repetitive matrix protein 3. (367 aa)
PRPF3U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1. (683 aa)
DHX16pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 isoform X1. (1044 aa)
ENSPCTP00005013941annotation not available (74 aa)
SF3B3Splicing factor 3B subunit 3. (1217 aa)
RBM10RNA-binding protein 10 isoform X1. (931 aa)
ENSPCTP00005014461annotation not available (156 aa)
CDC40pre-mRNA-processing factor 17. (607 aa)
RBM42RNA-binding protein 42 isoform X1. (477 aa)
WBP11WW domain-binding protein 11 isoform X2. (641 aa)
XAB2pre-mRNA-splicing factor SYF1 isoform X1. (853 aa)
PRPF4U4/U6 small nuclear ribonucleoprotein Prp4 isoform X2. (521 aa)
CWC22pre-mRNA-splicing factor CWC22 homolog. (901 aa)
PRPF18pre-mRNA-splicing factor 18 isoform X2. (342 aa)
DQX1ATP-dependent RNA helicase DQX1. (719 aa)
ENSPCTP00005015429Small nuclear ribonucleoprotein polypeptide G. (94 aa)
SF3B4Splicing factor 3B subunit 4. (424 aa)
CRNKL1Crooked neck-like protein 1 isoform X1. (693 aa)
DDX46Probable ATP-dependent RNA helicase DDX46. (961 aa)
DHX15pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15. (795 aa)
ENSPCTP00005016439annotation not available (92 aa)
CWC27Spliceosome-associated protein CWC27 homolog isoform X1. (473 aa)
PHF5APHD finger-like domain-containing protein 5A isoform X2. (114 aa)
CWC15Spliceosome-associated protein CWC15 homolog. (231 aa)
PPWD1Peptidylprolyl isomerase domain and WD repeat-containing protein 1 isoform X1. (641 aa)
DHX8ATP-dependent RNA helicase DHX8. (309 aa)
PUF60poly(U)-binding-splicing factor PUF60. (552 aa)
ENSPCTP00005017426annotation not available (203 aa)
DDX42ATP-dependent RNA helicase DDX42 isoform X1. (940 aa)
SNRNP35U11/U12 small nuclear ribonucleoprotein 35 kDa protein. (246 aa)
SUGP1SURP and G-patch domain-containing protein 1 isoform X1. (550 aa)
PRPF8pre-mRNA-processing-splicing factor 8. (1329 aa)
ENSPCTP00005018382annotation not available (217 aa)
ENSPCTP00005018712annotation not available (302 aa)
SNRPD2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (118 aa)
PPIL2RING-type E3 ubiquitin-protein ligase PPIL2 isoform X2. (591 aa)
LOC102987342Programmed cell death protein 7. (487 aa)
DAW1Dynein assembly factor with WDR repeat domains 1 isoform X1. (415 aa)
ENSPCTP00005019744annotation not available (68 aa)
LOC102995785E3 ubiquitin-protein ligase RNF113A-like. (335 aa)
SMNDC1Survival of motor neuron-related-splicing factor 30. (238 aa)
ENSPCTP00005020616annotation not available (49 aa)
BUD31Protein BUD31 homolog isoform X1. (149 aa)
ENSPCTP00005021370annotation not available (120 aa)
LOC102981475ATP-dependent RNA helicase DHX8 isoform X1. (927 aa)
CHERPCalcium homeostasis endoplasmic reticulum protein isoform X1. (925 aa)
ENSPCTP00005021724annotation not available (74 aa)
SNRNP48U11/U12 small nuclear ribonucleoprotein 48 kDa protein. (339 aa)
ENSPCTP00005021776annotation not available (72 aa)
TXNL4AThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (142 aa)
RBMX2RNA-binding motif protein, X-linked 2. (327 aa)
GCFC2GC-rich sequence DNA-binding factor 2 isoform X4. (796 aa)
WDR70WD repeat-containing protein 70 isoform X1. (655 aa)
YJU2Splicing factor YJU2. (321 aa)
SNRPCU1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] (159 aa)
FUBP1Far upstream element-binding protein 1 isoform X18. (655 aa)
LOC114485130U5 small nuclear ribonucleoprotein 200 kDa helicase-like. (595 aa)
ISY1pre-mRNA-splicing factor ISY1 homolog isoform X2. (299 aa)
PRPF6pre-mRNA-processing factor 6. (941 aa)
SNRPD3Small nuclear ribonucleoprotein Sm D3. (178 aa)
LOC114483901Leucine-rich repeat-containing protein 51-like. (54 aa)
SNRPA1U2 small nuclear ribonucleoprotein A. (255 aa)
ZCRB1Zinc finger CCHC-type and RNA-binding motif-containing protein 1 isoform X1. (217 aa)
SF3B6Splicing factor 3B subunit 6. (132 aa)
DHX35Probable ATP-dependent RNA helicase DHX35 isoform X2. (703 aa)
BUD13BUD13 homolog. (676 aa)
DHX38pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform X1. (1227 aa)
TXNL4BThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (149 aa)
EFTUD2116 kDa U5 small nuclear ribonucleoprotein component. (975 aa)
SNRPESmall nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (92 aa)
ENSPCTP00005026871annotation not available (125 aa)
LOC102994985Splicing factor 3A subunit 2. (198 aa)
IKProtein Red. (553 aa)
LOC114483883Leucine-rich repeat-containing protein 51-like isoform X1. (166 aa)
YBX1Nuclease-sensitive element-binding protein 1 isoform X3. (324 aa)
PPIL1Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (166 aa)
PPIHPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (177 aa)
SRRM2Serine/arginine repetitive matrix protein 2 isoform X1. (2736 aa)
UBL5Ubiquitin-like protein 5 isoform X2. (256 aa)
MFAP1Microfibrillar-associated protein 1. (439 aa)
ENSPCTP00005029299annotation not available (79 aa)
SNRPD1Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. (119 aa)
ENSPCTP00005029835annotation not available (123 aa)
AQRRNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing. (1485 aa)
RNF113AE3 ubiquitin-protein ligase RNF113A. (344 aa)
ENSPCTP00005030204annotation not available (66 aa)
PRPF19pre-mRNA-processing factor 19. (504 aa)
ENSPCTP00005031714annotation not available (98 aa)
SART1U4/U6.U5 tri-snRNP-associated protein 1. (801 aa)
SF3B2Splicing factor 3B subunit 2 isoform X2. (895 aa)
SNW1SNW domain-containing protein 1. (578 aa)
Your Current Organism:
Physeter catodon
NCBI taxonomy Id: 9755
Other names: P. catodon, Physeter macrocephalus, sperm whale
Server load: low (26%) [HD]