(25 nodes) Marvel domain network (Physeter catodon)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SYPL2	Synaptophysin-like protein 2. (264 aa)
	SYP	Synaptophysin. (266 aa)
	PLP2	Proteolipid protein 2. (222 aa)
	MYADM	Myeloid-associated differentiation marker. (321 aa)
	SYNGR3	Synaptogyrin. (229 aa)
	MYADML2	Myeloid-associated differentiation marker-like protein 2. (307 aa)
	SYNGR4	Synaptogyrin. (232 aa)
	PLLP	Plasmolipin. (177 aa)
	SYNPR	Synaptoporin. (285 aa)
	CMTM5	CKLF-like MARVEL transmembrane domain-containing protein 5 isoform X3. (156 aa)
	MARVELD1	MARVEL domain-containing protein 1. (173 aa)
	MAL2	Protein MAL2. (176 aa)
	MALL-2	MAL-like protein. (153 aa)
	CMTM4	CKLF-like MARVEL transmembrane domain-containing protein 4. (232 aa)
	MALL	LOW QUALITY PROTEIN: nephrocystin-1. (152 aa)
	CMTM3	CKLF-like MARVEL transmembrane domain-containing protein 3 isoform X1. (182 aa)
	CMTM8	CKLF-like MARVEL transmembrane domain-containing protein 8. (173 aa)
	CMTM2	CKLF-like MARVEL transmembrane domain-containing protein 2. (218 aa)
	CMTM7	CKLF-like MARVEL transmembrane domain-containing protein 7 isoform X2. (175 aa)
	CMTM6	CKLF-like MARVEL transmembrane domain-containing protein 6. (178 aa)
	MARVELD3	MARVEL domain-containing protein 3. (384 aa)
	SYNGR1	Synaptogyrin. (234 aa)
	SYNGR2	Synaptogyrin. (292 aa)
	SYPL1	Synaptophysin-like protein 1. (284 aa)
	OCLN	Occludin; May play a role in the formation and regulation of the tight junction (TJ) paracellular permeability barrier. Belongs to the ELL/occludin family. (522 aa)

Your Current Organism:

Physeter catodon

NCBI taxonomy Id: 9755
Other names: P. catodon, Physeter macrocephalus, sperm whale

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CMTM2	CMTM3	ENSPCTP00005013609	ENSPCTP00005013794	CKLF-like MARVEL transmembrane domain-containing protein 2.	CKLF-like MARVEL transmembrane domain-containing protein 3 isoform X1.	0.660
CMTM2	CMTM4	ENSPCTP00005013609	ENSPCTP00005013926	CKLF-like MARVEL transmembrane domain-containing protein 2.	CKLF-like MARVEL transmembrane domain-containing protein 4.	0.614
CMTM2	CMTM5	ENSPCTP00005013609	ENSPCTP00005019328	CKLF-like MARVEL transmembrane domain-containing protein 2.	CKLF-like MARVEL transmembrane domain-containing protein 5 isoform X3.	0.633
CMTM2	CMTM6	ENSPCTP00005013609	ENSPCTP00005013435	CKLF-like MARVEL transmembrane domain-containing protein 2.	CKLF-like MARVEL transmembrane domain-containing protein 6.	0.518
CMTM2	CMTM7	ENSPCTP00005013609	ENSPCTP00005013558	CKLF-like MARVEL transmembrane domain-containing protein 2.	CKLF-like MARVEL transmembrane domain-containing protein 7 isoform X2.	0.701
CMTM2	CMTM8	ENSPCTP00005013609	ENSPCTP00005013701	CKLF-like MARVEL transmembrane domain-containing protein 2.	CKLF-like MARVEL transmembrane domain-containing protein 8.	0.640
CMTM2	MALL-2	ENSPCTP00005013609	ENSPCTP00005013950	CKLF-like MARVEL transmembrane domain-containing protein 2.	MAL-like protein.	0.443
CMTM2	MARVELD1	ENSPCTP00005013609	ENSPCTP00005019052	CKLF-like MARVEL transmembrane domain-containing protein 2.	MARVEL domain-containing protein 1.	0.510
CMTM2	MYADML2	ENSPCTP00005013609	ENSPCTP00005030278	CKLF-like MARVEL transmembrane domain-containing protein 2.	Myeloid-associated differentiation marker-like protein 2.	0.510
CMTM2	SYPL2	ENSPCTP00005013609	ENSPCTP00005025669	CKLF-like MARVEL transmembrane domain-containing protein 2.	Synaptophysin-like protein 2.	0.452
CMTM3	CMTM2	ENSPCTP00005013794	ENSPCTP00005013609	CKLF-like MARVEL transmembrane domain-containing protein 3 isoform X1.	CKLF-like MARVEL transmembrane domain-containing protein 2.	0.660
CMTM3	CMTM4	ENSPCTP00005013794	ENSPCTP00005013926	CKLF-like MARVEL transmembrane domain-containing protein 3 isoform X1.	CKLF-like MARVEL transmembrane domain-containing protein 4.	0.779
CMTM3	CMTM6	ENSPCTP00005013794	ENSPCTP00005013435	CKLF-like MARVEL transmembrane domain-containing protein 3 isoform X1.	CKLF-like MARVEL transmembrane domain-containing protein 6.	0.552
CMTM3	CMTM7	ENSPCTP00005013794	ENSPCTP00005013558	CKLF-like MARVEL transmembrane domain-containing protein 3 isoform X1.	CKLF-like MARVEL transmembrane domain-containing protein 7 isoform X2.	0.748
CMTM3	CMTM8	ENSPCTP00005013794	ENSPCTP00005013701	CKLF-like MARVEL transmembrane domain-containing protein 3 isoform X1.	CKLF-like MARVEL transmembrane domain-containing protein 8.	0.700
CMTM3	MYADML2	ENSPCTP00005013794	ENSPCTP00005030278	CKLF-like MARVEL transmembrane domain-containing protein 3 isoform X1.	Myeloid-associated differentiation marker-like protein 2.	0.404
CMTM4	CMTM2	ENSPCTP00005013926	ENSPCTP00005013609	CKLF-like MARVEL transmembrane domain-containing protein 4.	CKLF-like MARVEL transmembrane domain-containing protein 2.	0.614
CMTM4	CMTM3	ENSPCTP00005013926	ENSPCTP00005013794	CKLF-like MARVEL transmembrane domain-containing protein 4.	CKLF-like MARVEL transmembrane domain-containing protein 3 isoform X1.	0.779
CMTM4	CMTM5	ENSPCTP00005013926	ENSPCTP00005019328	CKLF-like MARVEL transmembrane domain-containing protein 4.	CKLF-like MARVEL transmembrane domain-containing protein 5 isoform X3.	0.625
CMTM4	CMTM6	ENSPCTP00005013926	ENSPCTP00005013435	CKLF-like MARVEL transmembrane domain-containing protein 4.	CKLF-like MARVEL transmembrane domain-containing protein 6.	0.654