STRINGSTRING
IARS2 IARS2 EPRS1 EPRS1 MARS1 MARS1 PCYT2 PCYT2 DPH6 DPH6 ETFB ETFB CARS2 CARS2 PAPSS2 PAPSS2 ETFA ETFA ASNSD1 ASNSD1 PCYT1B PCYT1B WARS2 WARS2 LOC112062879 LOC112062879 CRY2 CRY2 CARS1 CARS1 LOC114485821 LOC114485821 VARS2 VARS2 NADSYN1 NADSYN1 LOC114485545 LOC114485545 RARS2 RARS2 NMNAT3 NMNAT3 YARS1 YARS1 MARS2 MARS2 PAPSS1 PAPSS1 RARS1 RARS1 TRMU TRMU LARS1 LARS1 NMNAT2 NMNAT2 YARS2 YARS2 QARS1 QARS1 FLAD1 FLAD1 LARS2 LARS2 VARS1 VARS1 COASY COASY ASS1 ASS1 CTU2 CTU2 EARS2 EARS2 WARS1 WARS1 IARS1 IARS1 LOC102987131 LOC102987131 CRY1 CRY1 ASNS ASNS PCYT1A PCYT1A NMNAT1 NMNAT1 GMPS GMPS
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
IARS2isoleucine--tRNA ligase, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family. (1001 aa)
EPRS1Bifunctional glutamate/proline--tRNA ligase. (1512 aa)
MARS1methionine--tRNA ligase, cytoplasmic isoform X2; Belongs to the class-I aminoacyl-tRNA synthetase family. (900 aa)
PCYT2Ethanolamine-phosphate cytidylyltransferase isoform X2. (407 aa)
DPH6Diphthine--ammonia ligase; Amidase that catalyzes the last step of diphthamide biosynthesis using ammonium and ATP. (267 aa)
ETFBElectron transfer flavoprotein subunit beta. (334 aa)
CARS2Probable cysteine--tRNA ligase, mitochondrial. (553 aa)
PAPSS2Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2 isoform X2. (621 aa)
ETFAElectron transfer flavoprotein subunit alpha, mitochondrial isoform X1. (333 aa)
ASNSD1Asparagine synthetase domain-containing protein 1. (643 aa)
PCYT1BCholine-phosphate cytidylyltransferase B. (369 aa)
WARS2tryptophan--tRNA ligase, mitochondrial isoform X1; Belongs to the class-I aminoacyl-tRNA synthetase family. (360 aa)
LOC112062879LOW QUALITY PROTEIN: cysteine--tRNA ligase, cytoplasmic-like. (255 aa)
CRY2Cryptochrome-2. (614 aa)
CARS1cysteine--tRNA ligase, cytoplasmic isoform X5. (831 aa)
LOC114485821Uncharacterized protein LOC114485821; Belongs to the class-I aminoacyl-tRNA synthetase family. (186 aa)
VARS2valine--tRNA ligase, mitochondrial isoform X1; Belongs to the class-I aminoacyl-tRNA synthetase family. (1064 aa)
NADSYN1Glutamine-dependent NAD(+) synthetase; In the C-terminal section; belongs to the NAD synthetase family. (706 aa)
LOC114485545tryptophan--tRNA ligase, cytoplasmic-like. (65 aa)
RARS2Probable arginine--tRNA ligase, mitochondrial isoform X1; Belongs to the class-I aminoacyl-tRNA synthetase family. (578 aa)
NMNAT3Nicotinamide-nucleotide adenylyltransferase. (244 aa)
YARS1Tyrosine--tRNA ligase. (528 aa)
MARS2methionine--tRNA ligase, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family. (593 aa)
PAPSS1Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 isoform X1. (624 aa)
RARS1arginine--tRNA ligase, cytoplasmic isoform X1; Belongs to the class-I aminoacyl-tRNA synthetase family. (660 aa)
TRMUMitochondrial tRNA-specific 2-thiouridylase 1 isoform X1. (292 aa)
LARS1leucine--tRNA ligase, cytoplasmic isoform X1; Belongs to the class-I aminoacyl-tRNA synthetase family. (1184 aa)
NMNAT2Nicotinamide/nicotinic acid mononucleotide adenylyltransferase 2 isoform X1. (307 aa)
YARS2Tyrosine--tRNA ligase. (478 aa)
QARS1glutamine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (775 aa)
FLAD1FAD synthase; Catalyzes the adenylation of flavin mononucleotide (FMN) to form flavin adenine dinucleotide (FAD) coenzyme. In the C-terminal section; belongs to the PAPS reductase family. FAD1 subfamily. (579 aa)
LARS2Probable leucine--tRNA ligase, mitochondrial isoform X1; Belongs to the class-I aminoacyl-tRNA synthetase family. (903 aa)
VARS1valine--tRNA ligase isoform X2; Belongs to the class-I aminoacyl-tRNA synthetase family. (1264 aa)
COASYBifunctional coenzyme A synthase isoform X1. (562 aa)
ASS1Argininosuccinate synthase. (154 aa)
CTU2Cytoplasmic tRNA 2-thiolation protein 2; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). May act by forming a heterodimer with CTU1/ATPBD3 that ligates sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. Belongs to the CTU2/NCS2 family. (523 aa)
EARS2Probable glutamate--tRNA ligase, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family. (516 aa)
WARS1tryptophan--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family. (409 aa)
IARS1isoleucine--tRNA ligase, cytoplasmic isoform X2; Belongs to the class-I aminoacyl-tRNA synthetase family. (1262 aa)
LOC102987131Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position; Belongs to the TtcA family. CTU1/NCS6/ATPBD3 subfamily. (437 aa)
CRY1Cryptochrome-1 isoform X1. (587 aa)
ASNSAsparagine synthetase [glutamine-hydrolyzing] isoform X1. (561 aa)
PCYT1ACholine-phosphate cytidylyltransferase A. (381 aa)
NMNAT1Nicotinamide-nucleotide adenylyltransferase. (281 aa)
GMPSGMP synthase [glutamine-hydrolyzing]. (693 aa)
Your Current Organism:
Physeter catodon
NCBI taxonomy Id: 9755
Other names: P. catodon, Physeter macrocephalus, sperm whale
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