(22 nodes) Extended PHD (ePHD) domain network (Physeter catodon)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PHF6	PHD finger protein 6 isoform X3. (366 aa)
	PHF7	PHD finger protein 7 isoform X2. (383 aa)
	KDM4A	Lysine-specific demethylase 4A isoform X1. (1073 aa)
	PHF11	PHD finger protein 11 isoform X1. (399 aa)
	KDM4B	Lysine-specific demethylase 4B isoform X1. (1027 aa)
	KMT2B	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily. (2719 aa)
	KMT2A	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily. (3972 aa)
	JADE1	Protein Jade-1 isoform X4. (896 aa)
	JADE2	E3 ubiquitin-protein ligase Jade-2 isoform X1. (828 aa)
	JADE3	Protein Jade-3. (823 aa)
	KMT2D	Histone-lysine N-methyltransferase 2D isoform X2. (712 aa)
	BRPF1	Peregrin isoform X2. (1220 aa)
	KMT2C	Histone-lysine N-methyltransferase 2C isoform X14. (4957 aa)
	KDM4C	Lysine-specific demethylase 4C isoform X3. (1053 aa)
	G2E3	G2/M phase-specific E3 ubiquitin-protein ligase isoform X1. (730 aa)
	RAI1	Retinoic acid-induced protein 1. (1886 aa)
	MLLT10	Protein AF-10 isoform X1. (1063 aa)
	BRD1	Bromodomain-containing protein 1 isoform X1. (1199 aa)
	PHF14	PHD finger protein 14 isoform X6. (945 aa)
	TCF20	Transcription factor 20 isoform X1. (1964 aa)
	MLLT6	Protein AF-17 isoform X1. (1088 aa)
	BRPF3	Bromodomain and PHD finger-containing protein 3 isoform X1. (1228 aa)

Your Current Organism:

Physeter catodon

NCBI taxonomy Id: 9755
Other names: P. catodon, Physeter macrocephalus, sperm whale

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BRD1	BRPF1	ENSPCTP00005002484	ENSPCTP00005012233	Bromodomain-containing protein 1 isoform X1.	Peregrin isoform X2.	0.510
BRD1	BRPF3	ENSPCTP00005002484	ENSPCTP00005027128	Bromodomain-containing protein 1 isoform X1.	Bromodomain and PHD finger-containing protein 3 isoform X1.	0.777
BRD1	TCF20	ENSPCTP00005002484	ENSPCTP00005000450	Bromodomain-containing protein 1 isoform X1.	Transcription factor 20 isoform X1.	0.506
BRPF1	BRD1	ENSPCTP00005012233	ENSPCTP00005002484	Peregrin isoform X2.	Bromodomain-containing protein 1 isoform X1.	0.510
BRPF1	BRPF3	ENSPCTP00005012233	ENSPCTP00005027128	Peregrin isoform X2.	Bromodomain and PHD finger-containing protein 3 isoform X1.	0.610
BRPF3	BRD1	ENSPCTP00005027128	ENSPCTP00005002484	Bromodomain and PHD finger-containing protein 3 isoform X1.	Bromodomain-containing protein 1 isoform X1.	0.777
BRPF3	BRPF1	ENSPCTP00005027128	ENSPCTP00005012233	Bromodomain and PHD finger-containing protein 3 isoform X1.	Peregrin isoform X2.	0.610
KDM4A	KDM4B	ENSPCTP00005024510	ENSPCTP00005021131	Lysine-specific demethylase 4A isoform X1.	Lysine-specific demethylase 4B isoform X1.	0.579
KDM4A	KMT2A	ENSPCTP00005024510	ENSPCTP00005018153	Lysine-specific demethylase 4A isoform X1.	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	0.421
KDM4B	KDM4A	ENSPCTP00005021131	ENSPCTP00005024510	Lysine-specific demethylase 4B isoform X1.	Lysine-specific demethylase 4A isoform X1.	0.579
KMT2A	KDM4A	ENSPCTP00005018153	ENSPCTP00005024510	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	Lysine-specific demethylase 4A isoform X1.	0.421
KMT2A	KMT2B	ENSPCTP00005018153	ENSPCTP00005018276	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	0.484
KMT2A	KMT2C	ENSPCTP00005018153	ENSPCTP00005012132	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	Histone-lysine N-methyltransferase 2C isoform X14.	0.932
KMT2A	KMT2D	ENSPCTP00005018153	ENSPCTP00005012293	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	Histone-lysine N-methyltransferase 2D isoform X2.	0.622
KMT2B	KMT2A	ENSPCTP00005018276	ENSPCTP00005018153	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	0.484
KMT2B	KMT2C	ENSPCTP00005018276	ENSPCTP00005012132	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	Histone-lysine N-methyltransferase 2C isoform X14.	0.521
KMT2B	KMT2D	ENSPCTP00005018276	ENSPCTP00005012293	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	Histone-lysine N-methyltransferase 2D isoform X2.	0.580
KMT2C	KMT2A	ENSPCTP00005012132	ENSPCTP00005018153	Histone-lysine N-methyltransferase 2C isoform X14.	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	0.932
KMT2C	KMT2B	ENSPCTP00005012132	ENSPCTP00005018276	Histone-lysine N-methyltransferase 2C isoform X14.	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	0.521
KMT2C	KMT2D	ENSPCTP00005012132	ENSPCTP00005012293	Histone-lysine N-methyltransferase 2C isoform X14.	Histone-lysine N-methyltransferase 2D isoform X2.	0.776