(8 nodes) Enhancer of polycomb-like network (Physeter catodon)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	EPC2	Enhancer of polycomb homolog. (807 aa)
	BRD1	Bromodomain-containing protein 1 isoform X1. (1199 aa)
	EPC1	Enhancer of polycomb homolog. (813 aa)
	BRPF1	Peregrin isoform X2. (1220 aa)
	JADE3	Protein Jade-3. (823 aa)
	JADE2	E3 ubiquitin-protein ligase Jade-2 isoform X1. (828 aa)
	JADE1	Protein Jade-1 isoform X4. (896 aa)
	BRPF3	Bromodomain and PHD finger-containing protein 3 isoform X1. (1228 aa)

Your Current Organism:

Physeter catodon

NCBI taxonomy Id: 9755
Other names: P. catodon, Physeter macrocephalus, sperm whale

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BRD1	BRPF1	ENSPCTP00005002484	ENSPCTP00005012233	Bromodomain-containing protein 1 isoform X1.	Peregrin isoform X2.	0.510
BRD1	BRPF3	ENSPCTP00005002484	ENSPCTP00005027128	Bromodomain-containing protein 1 isoform X1.	Bromodomain and PHD finger-containing protein 3 isoform X1.	0.777
BRPF1	BRD1	ENSPCTP00005012233	ENSPCTP00005002484	Peregrin isoform X2.	Bromodomain-containing protein 1 isoform X1.	0.510
BRPF1	BRPF3	ENSPCTP00005012233	ENSPCTP00005027128	Peregrin isoform X2.	Bromodomain and PHD finger-containing protein 3 isoform X1.	0.610
BRPF3	BRD1	ENSPCTP00005027128	ENSPCTP00005002484	Bromodomain and PHD finger-containing protein 3 isoform X1.	Bromodomain-containing protein 1 isoform X1.	0.777
BRPF3	BRPF1	ENSPCTP00005027128	ENSPCTP00005012233	Bromodomain and PHD finger-containing protein 3 isoform X1.	Peregrin isoform X2.	0.610
EPC1	EPC2	ENSPCTP00005005125	ENSPCTP00005001945	Enhancer of polycomb homolog.	Enhancer of polycomb homolog.	0.521
EPC2	EPC1	ENSPCTP00005001945	ENSPCTP00005005125	Enhancer of polycomb homolog.	Enhancer of polycomb homolog.	0.521