STRINGSTRING
CHD3 CHD3 GATAD2B GATAD2B PHF21A PHF21A MTA3 MTA3 RCOR1 RCOR1 CHD5 CHD5 KDM1A KDM1A GATAD2A GATAD2A WDR73 WDR73 CDK2AP2 CDK2AP2 RCOR3 RCOR3 MBD2 MBD2 NYNRIN NYNRIN ZNF217 ZNF217 HMG20A HMG20A CHD4 CHD4 HMG20B HMG20B GSE1 GSE1 PHF21B PHF21B RCOR2 RCOR2 MBD3 MBD3 MTA2 MTA2 CDK2AP1 CDK2AP1 MTA1 MTA1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CHD3Chromodomain helicase DNA binding protein 3. (1876 aa)
GATAD2BGATA zinc finger domain containing 2B. (593 aa)
PHF21APHD finger protein 21A. (630 aa)
MTA3Metastasis associated 1 family member 3. (532 aa)
RCOR1REST corepressor 1. (369 aa)
CHD5Chromodomain helicase DNA binding protein 5. (1928 aa)
KDM1ALysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. (875 aa)
GATAD2AGATA zinc finger domain containing 2A. (628 aa)
WDR73WD repeat domain 73. (369 aa)
CDK2AP2Cyclin dependent kinase 2 associated protein 2. (130 aa)
RCOR3REST corepressor 3. (478 aa)
MBD2Methyl-CpG binding domain protein 2. (295 aa)
NYNRINNYN domain and retroviral integrase containing. (1907 aa)
ZNF217Zinc finger protein 217. (1062 aa)
HMG20AHigh mobility group 20A. (347 aa)
CHD4Uncharacterized protein. (1895 aa)
HMG20BHigh mobility group 20B. (316 aa)
GSE1Gse1 coiled-coil protein. (1202 aa)
PHF21BPHD finger protein 21B. (436 aa)
RCOR2REST corepressor 2. (524 aa)
MBD3Methyl-CpG binding domain protein 3. (269 aa)
MTA2Metastasis associated 1 family member 2. (667 aa)
CDK2AP1Cyclin dependent kinase 2 associated protein 1. (103 aa)
MTA1Metastasis associated 1. (660 aa)
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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