STRINGSTRING
PTN PTN CHRNA9 CHRNA9 KIAA0319L KIAA0319L G3T4H8_LOXAF G3T4H8_LOXAF STRA6 STRA6 HTT HTT SLC1A3 SLC1A3 USP53 USP53 XPC XPC ATOH7 ATOH7 UCN UCN SLC26A5 SLC26A5 SLITRK6 SLITRK6 SHANK3 SHANK3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PTNPleiotrophin. (168 aa)
CHRNA9Cholinergic receptor nicotinic alpha 9 subunit. (479 aa)
KIAA0319LKIAA0319 like. (1046 aa)
G3T4H8_LOXAFPKD domain-containing protein. (585 aa)
STRA6Stimulated by retinoic acid 6. (669 aa)
HTTHuntingtin. (3126 aa)
SLC1A3Amino acid transporter. (542 aa)
USP53Ubiquitin specific peptidase 53. (1053 aa)
XPCXPC complex subunit, DNA damage recognition and repair factor. (684 aa)
ATOH7Atonal bHLH transcription factor 7. (152 aa)
UCNUrocortin. (117 aa)
SLC26A5Prestin; Motor protein that converts auditory stimuli to length changes in outer hair cells and mediates sound amplification in the mammalian hearing organ; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family. (736 aa)
SLITRK6SLIT and NTRK like family member 6. (840 aa)
SHANK3ANK_REP_REGION domain-containing protein. (342 aa)
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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