STRINGSTRING
GTF2F1 GTF2F1 GTF2A1 GTF2A1 G3SPD3_LOXAF G3SPD3_LOXAF TBP TBP SNAPC5 SNAPC5 G3SZ57_LOXAF G3SZ57_LOXAF GTF2E1 GTF2E1 GTF2A2 GTF2A2 TAF6 TAF6 TBPL1 TBPL1 TBPL2 TBPL2 DR1 DR1 G3TJ62_LOXAF G3TJ62_LOXAF GTF2H4 GTF2H4 SNAPC2 SNAPC2 GTF2B GTF2B GTF2E2 GTF2E2 GTF2H3 GTF2H3 TAF5 TAF5 TAF1 TAF1 DRAP1 DRAP1 TAF10 TAF10 TAF6L TAF6L
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GTF2F1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (400 aa)
GTF2A1General transcription factor IIA subunit 1. (367 aa)
G3SPD3_LOXAFTranscription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (504 aa)
TBPTATA-box binding protein. (314 aa)
SNAPC5Small nuclear RNA activating complex polypeptide 5. (99 aa)
G3SZ57_LOXAFTAFII55_N domain-containing protein. (331 aa)
GTF2E1General transcription factor IIE subunit 1. (438 aa)
GTF2A2General transcription factor IIA subunit 2. (141 aa)
TAF6TATA-box binding protein associated factor 6. (678 aa)
TBPL1TATA-box binding protein like 1. (186 aa)
TBPL2TATA-box binding protein like 2. (351 aa)
DR1Down-regulator of transcription 1. (176 aa)
G3TJ62_LOXAFUncharacterized protein. (463 aa)
GTF2H4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (463 aa)
SNAPC2Small nuclear RNA activating complex polypeptide 2. (337 aa)
GTF2BGeneral transcription factor IIB. (316 aa)
GTF2E2Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (291 aa)
GTF2H3General transcription factor IIH subunit 3. (315 aa)
TAF5TATA-box binding protein associated factor 5. (801 aa)
TAF1Transcription initiation factor TFIID subunit. (1898 aa)
DRAP1DR1 associated protein 1. (205 aa)
TAF10Uncharacterized protein. (108 aa)
TAF6LTATA-box binding protein associated factor 6 like. (621 aa)
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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