STRINGSTRING
CHD4 CHD4 MTA1 MTA1 MTA2 MTA2 CHD3 CHD3 RBBP4 RBBP4 GATAD2B GATAD2B MTA3 MTA3 HDAC1 HDAC1 HDAC2 HDAC2 CHD5 CHD5 GATAD2A GATAD2A RBBP7 RBBP7
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CHD4Uncharacterized protein. (1895 aa)
MTA1Metastasis associated 1. (660 aa)
MTA2Metastasis associated 1 family member 2. (667 aa)
CHD3Chromodomain helicase DNA binding protein 3. (1876 aa)
RBBP4RB binding protein 4, chromatin remodeling factor. (425 aa)
GATAD2BGATA zinc finger domain containing 2B. (593 aa)
MTA3Metastasis associated 1 family member 3. (532 aa)
HDAC1Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. (482 aa)
HDAC2Histone deacetylase 2; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. (487 aa)
CHD5Chromodomain helicase DNA binding protein 5. (1928 aa)
GATAD2AGATA zinc finger domain containing 2A. (628 aa)
RBBP7RB binding protein 7, chromatin remodeling factor. (426 aa)
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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