STRINGSTRING
JAM3 JAM3 VCL VCL RAMP2 RAMP2 ZNF703 ZNF703 HIPK1 HIPK1 DLG5 DLG5 PAK2 PAK2 TBCD TBCD CTNNB1 CTNNB1 SMAD7 SMAD7
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
JAM3Junctional adhesion molecule 3. (311 aa)
VCLVinculin. (1066 aa)
RAMP2Receptor activity modifying protein 2. (176 aa)
ZNF703Zinc finger protein 703. (584 aa)
HIPK1Homeodomain interacting protein kinase 1. (1211 aa)
DLG5Discs large MAGUK scaffold protein 5; Belongs to the MAGUK family. (1862 aa)
PAK2Non-specific serine/threonine protein kinase. (524 aa)
TBCDTubulin folding cofactor D. (1138 aa)
CTNNB1Catenin beta 1. (780 aa)
SMAD7Mothers against decapentaplegic homolog. (405 aa)
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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