STRINGSTRING
ALYREF ALYREF TUT1 TUT1 TIAL1 TIAL1 TIA1 TIA1 PABPC1L PABPC1L RBFOX2 RBFOX2 PSPC1 PSPC1 RBM41 RBM41 HNRNPLL HNRNPLL U2AF1 U2AF1 SCAF8 SCAF8 ACIN1 ACIN1 SAFB2 SAFB2 SAFB SAFB RBM44 RBM44 RBM19 RBM19 TNRC6A TNRC6A ELAVL1 ELAVL1 ENOX1 ENOX1 SPEN SPEN ELAVL3 ELAVL3 LARP4 LARP4 SRSF5 SRSF5 SRSF12 SRSF12 RBMX RBMX RBM27 RBM27 NELFE NELFE RDM1 RDM1 G3U1E6_LOXAF G3U1E6_LOXAF CSTF2 CSTF2 G3U1U2_LOXAF G3U1U2_LOXAF REXO5 REXO5 NCBP2 NCBP2 RBM22 RBM22 RBM6 RBM6 RBM5 RBM5 RBM11 RBM11 SART3 SART3 UHMK1 UHMK1 RBM45 RBM45 SRSF2 SRSF2 TRNAU1AP TRNAU1AP DND1 DND1 ZNF638 ZNF638 SF3B4 SF3B4 HNRNPDL HNRNPDL SNRPB2 SNRPB2 ZCRB1 ZCRB1 DAZL DAZL G3BP1 G3BP1 ZRSR2 ZRSR2 G3T3J4_LOXAF G3T3J4_LOXAF MSI1 MSI1 EIF4B EIF4B RBM12 RBM12 G3TZK9_LOXAF G3TZK9_LOXAF NCBP2L NCBP2L MYEF2 MYEF2 CELF5 CELF5 SCAF4 SCAF4 ELAVL2 ELAVL2 SNRPA SNRPA G3U2H0_LOXAF G3U2H0_LOXAF G3TWJ2_LOXAF G3TWJ2_LOXAF G3TVP3_LOXAF G3TVP3_LOXAF A1CF A1CF RBM4 RBM4 RBFOX3 RBFOX3 G3TV31_LOXAF G3TV31_LOXAF G3TU55_LOXAF G3TU55_LOXAF G3TTL3_LOXAF G3TTL3_LOXAF SETD1B SETD1B PABPC1 PABPC1 PUF60 PUF60 CELF4 CELF4 G3BP2 G3BP2 SETD1A SETD1A TRMT2A TRMT2A RBM8A RBM8A G3TN89_LOXAF G3TN89_LOXAF RBM10 RBM10 U2SURP U2SURP RBM4B RBM4B NOL8 NOL8 IGF2BP1 IGF2BP1 MTHFSD MTHFSD FUS FUS ESRP1 ESRP1 HNRNPAB HNRNPAB ELAVL4 ELAVL4 SSB SSB RNPS1 RNPS1 CNOT4 CNOT4 HNRNPF HNRNPF RBMS3 RBMS3 RALY RALY RBPMS RBPMS PABPC4 PABPC4 RBM24 RBM24 SRSF10 SRSF10 HNRNPA2B1 HNRNPA2B1 CSTF2T CSTF2T G3U8C7_LOXAF G3U8C7_LOXAF RBM26 RBM26 RBM28 RBM28 BOLL BOLL G3T6Q3_LOXAF G3T6Q3_LOXAF TNRC6C TNRC6C PTBP3 PTBP3 RBFOX1 RBFOX1 RBM17 RBM17 RBM47 RBM47 RBM18 RBM18 PPARGC1B PPARGC1B RBM7 RBM7 RRP7A RRP7A RAVER2 RAVER2 RBM15B RBM15B HNRNPR HNRNPR RBM15 RBM15 HNRNPH3 HNRNPH3 PPARGC1A PPARGC1A G3TAK4_LOXAF G3TAK4_LOXAF NCL NCL NONO NONO HNRNPM HNRNPM CELF2 CELF2 SREK1 SREK1 PPRC1 PPRC1 RBM34 RBM34 HTATSF1 HTATSF1 TARDBP TARDBP ESRP2 ESRP2 POLDIP3 POLDIP3 RBM42 RBM42 LARP4B LARP4B G3U8W5_LOXAF G3U8W5_LOXAF SRSF6 SRSF6 U2AF1L4 U2AF1L4 PTBP1 PTBP1 RBM12B RBM12B G3UC69_LOXAF G3UC69_LOXAF G3UCF3_LOXAF G3UCF3_LOXAF G3UCI8_LOXAF G3UCI8_LOXAF RNPC3 RNPC3 SRSF4 SRSF4 G3UEJ5_LOXAF G3UEJ5_LOXAF TRA2B TRA2B RBM39 RBM39 HNRNPA0 HNRNPA0 LOC100659162 LOC100659162 NIFK NIFK SRSF9 SRSF9 RBMS2 RBMS2 SRSF7 SRSF7 CPSF7 CPSF7 EIF3B EIF3B CELF3 CELF3 G3UIN6_LOXAF G3UIN6_LOXAF HNRNPA1 HNRNPA1 ENOX2 ENOX2 SRSF1 SRSF1 G3UJR0_LOXAF G3UJR0_LOXAF CELF1 CELF1 SF3B6 SF3B6 RAVER1 RAVER1 TRA2A TRA2A SNRNP70 SNRNP70 CPSF6 CPSF6 PPIL4 PPIL4 G3UMB3_LOXAF G3UMB3_LOXAF G3U434_LOXAF G3U434_LOXAF PTBP2 PTBP2 RBM43 RBM43 SNRNP35 SNRNP35 RBM3 RBM3 CPEB1 CPEB1 G3TLQ7_LOXAF G3TLQ7_LOXAF RBPMS2 RBPMS2 CPEB3 CPEB3 G3TL85_LOXAF G3TL85_LOXAF RBM23 RBM23 TAF15 TAF15 SRSF3 SRSF3 SYNCRIP SYNCRIP DAZAP1 DAZAP1 U2AF2 U2AF2 SLTM SLTM ALKBH8 ALKBH8 RBMX2 RBMX2 MARF1 MARF1 RBMS1 RBMS1 IGF2BP2 IGF2BP2 GRSF1 GRSF1 HNRNPD HNRNPD CPEB4 CPEB4 SFPQ SFPQ SRSF11 SRSF11 RBM33 RBM33 LARP7 LARP7 HNRNPH1 HNRNPH1 EWSR1 EWSR1 RBM46 RBM46 EIF4H EIF4H PABPN1 PABPN1 G3U4N4_LOXAF G3U4N4_LOXAF G3U4Z2_LOXAF G3U4Z2_LOXAF
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ALYREFAly/REF export factor. (187 aa)
TUT1RRM domain-containing protein. (869 aa)
TIAL1TIA1 cytotoxic granule associated RNA binding protein like 1. (381 aa)
TIA1TIA1 cytotoxic granule associated RNA binding protein. (386 aa)
PABPC1LPolyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (624 aa)
RBFOX2RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events. (416 aa)
PSPC1Paraspeckle component 1. (523 aa)
RBM41RNA binding motif protein 41. (436 aa)
HNRNPLLHeterogeneous nuclear ribonucleoprotein L like. (486 aa)
U2AF1Uncharacterized protein. (240 aa)
SCAF8SR-related CTD associated factor 8. (1277 aa)
ACIN1Apoptotic chromatin condensation inducer 1. (1346 aa)
SAFB2Scaffold attachment factor B2. (930 aa)
SAFBScaffold attachment factor B. (916 aa)
RBM44RNA binding motif protein 44. (1044 aa)
RBM19RNA binding motif protein 19. (843 aa)
TNRC6ATrinucleotide repeat containing adaptor 6A. (1851 aa)
ELAVL1ELAV-like protein; Belongs to the RRM elav family. (326 aa)
ENOX1Ecto-NOX disulfide-thiol exchanger 1. (663 aa)
SPENSpen family transcriptional repressor. (3666 aa)
ELAVL3ELAV-like protein; Belongs to the RRM elav family. (368 aa)
LARP4La ribonucleoprotein domain family member 4. (723 aa)
SRSF5Serine and arginine rich splicing factor 5. (271 aa)
SRSF12Serine and arginine rich splicing factor 12. (241 aa)
RBMXRNA binding motif protein X-linked. (391 aa)
RBM27Uncharacterized protein. (1065 aa)
NELFENegative elongation factor complex member E. (382 aa)
RDM1RAD52 motif containing 1. (284 aa)
G3U1E6_LOXAFUncharacterized protein. (221 aa)
CSTF2Cleavage stimulation factor subunit 2. (597 aa)
G3U1U2_LOXAFUncharacterized protein. (261 aa)
REXO5RNA exonuclease 5. (759 aa)
NCBP2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (156 aa)
RBM22RNA binding motif protein 22. (420 aa)
RBM6RNA binding motif protein 6. (986 aa)
RBM5RNA binding motif protein 5. (816 aa)
RBM11RNA binding motif protein 11. (238 aa)
SART3Spliceosome associated factor 3, U4/U6 recycling protein. (973 aa)
UHMK1U2AF homology motif kinase 1. (419 aa)
RBM45RNA binding motif protein 45. (389 aa)
SRSF2RRM domain-containing protein. (211 aa)
TRNAU1APtRNA selenocysteine 1 associated protein 1. (287 aa)
DND1DND microRNA-mediated repression inhibitor 1. (351 aa)
ZNF638Zinc finger protein 638. (1972 aa)
SF3B4Splicing factor 3b subunit 4. (425 aa)
HNRNPDLHeterogeneous nuclear ribonucleoprotein D like. (420 aa)
SNRPB2Small nuclear ribonucleoprotein polypeptide B2. (225 aa)
ZCRB1Zinc finger CCHC-type and RNA binding motif containing 1. (217 aa)
DAZLRRM domain-containing protein. (294 aa)
G3BP1G3BP stress granule assembly factor 1. (465 aa)
ZRSR2Uncharacterized protein. (446 aa)
G3T3J4_LOXAFRRM domain-containing protein. (335 aa)
MSI1Musashi RNA binding protein 1. (330 aa)
EIF4BEukaryotic translation initiation factor 4B. (612 aa)
RBM12RNA binding motif protein 12. (929 aa)
G3TZK9_LOXAFUncharacterized protein. (523 aa)
NCBP2LNuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (158 aa)
MYEF2Myelin expression factor 2. (603 aa)
CELF5RRM domain-containing protein. (380 aa)
SCAF4SR-related CTD associated factor 4. (1197 aa)
ELAVL2ELAV-like protein; Belongs to the RRM elav family. (389 aa)
SNRPASmall nuclear ribonucleoprotein polypeptide A. (285 aa)
G3U2H0_LOXAFUncharacterized protein. (590 aa)
G3TWJ2_LOXAFRRM domain-containing protein. (241 aa)
G3TVP3_LOXAFUncharacterized protein. (365 aa)
A1CFAPOBEC1 complementation factor. (595 aa)
RBM4RNA binding motif protein 4. (365 aa)
RBFOX3RNA binding protein fox-1 homolog 3; RNA-binding protein that regulates alternative splicing events. (395 aa)
G3TV31_LOXAFU2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (471 aa)
G3TU55_LOXAFRRM domain-containing protein. (487 aa)
G3TTL3_LOXAFUncharacterized protein. (381 aa)
SETD1BSET domain containing 1B, histone lysine methyltransferase. (1772 aa)
PABPC1Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (644 aa)
PUF60Poly(U) binding splicing factor 60. (556 aa)
CELF4CUGBP Elav-like family member 4. (504 aa)
G3BP2G3BP stress granule assembly factor 2. (491 aa)
SETD1ASET domain containing 1A, histone lysine methyltransferase. (1691 aa)
TRMT2AtRNA methyltransferase 2 homolog A; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (616 aa)
RBM8ARNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (174 aa)
G3TN89_LOXAFUncharacterized protein. (200 aa)
RBM10RNA binding motif protein 10. (930 aa)
U2SURPU2 snRNP associated SURP domain containing. (1029 aa)
RBM4BRNA binding motif protein 4B. (359 aa)
NOL8Nucleolar protein 8. (1156 aa)
IGF2BP1Insulin like growth factor 2 mRNA binding protein 1. (577 aa)
MTHFSDMethenyltetrahydrofolate synthetase domain containing. (386 aa)
FUSFUS RNA binding protein. (518 aa)
ESRP1Epithelial splicing regulatory protein 1. (681 aa)
HNRNPABHeterogeneous nuclear ribonucleoprotein A/B. (327 aa)
ELAVL4ELAV-like protein; Belongs to the RRM elav family. (385 aa)
SSBUncharacterized protein. (422 aa)
RNPS1RNA binding protein with serine rich domain 1. (313 aa)
CNOT4CCR4-NOT transcription complex subunit 4. (713 aa)
HNRNPFHeterogeneous nuclear ribonucleoprotein F. (415 aa)
RBMS3RNA binding motif single stranded interacting protein 3. (436 aa)
RALYRALY heterogeneous nuclear ribonucleoprotein. (313 aa)
RBPMSRNA binding protein, mRNA processing factor. (219 aa)
PABPC4Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (660 aa)
RBM24RNA binding motif protein 24. (237 aa)
SRSF10Serine and arginine rich splicing factor 10. (264 aa)
HNRNPA2B1Heterogeneous nuclear ribonucleoprotein A2/B1. (410 aa)
CSTF2TCleavage stimulation factor subunit 2 tau variant. (565 aa)
G3U8C7_LOXAFUncharacterized protein. (480 aa)
RBM26RNA binding motif protein 26. (1015 aa)
RBM28RNA binding motif protein 28. (756 aa)
BOLLBoule homolog, RNA binding protein. (286 aa)
G3T6Q3_LOXAFRNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (175 aa)
TNRC6CTrinucleotide repeat containing adaptor 6C. (1878 aa)
PTBP3Polypyrimidine tract binding protein 3. (523 aa)
RBFOX1RNA binding fox-1 homolog 1. (308 aa)
RBM17RNA binding motif protein 17. (407 aa)
RBM47RNA binding motif protein 47. (593 aa)
RBM18RNA binding motif protein 18. (190 aa)
PPARGC1BPPARG coactivator 1 beta. (994 aa)
RBM7RRM domain-containing protein. (268 aa)
RRP7ARibosomal RNA processing 7 homolog A. (280 aa)
RAVER2Ribonucleoprotein, PTB binding 2. (604 aa)
RBM15BRNA binding motif protein 15B. (563 aa)
HNRNPRHeterogeneous nuclear ribonucleoprotein R. (633 aa)
RBM15RNA binding motif protein 15. (959 aa)
HNRNPH3Heterogeneous nuclear ribonucleoprotein H3. (347 aa)
PPARGC1APPARG coactivator 1 alpha. (796 aa)
G3TAK4_LOXAFUncharacterized protein. (889 aa)
NCLNucleolin. (675 aa)
NONONon-POU domain containing octamer binding. (472 aa)
HNRNPMHeterogeneous nuclear ribonucleoprotein M. (728 aa)
CELF2CUGBP Elav-like family member 2. (526 aa)
SREK1Splicing regulatory glutamic acid and lysine rich protein 1. (607 aa)
PPRC1PPARG related coactivator 1. (1637 aa)
RBM34RNA binding motif protein 34. (438 aa)
HTATSF1HIV-1 Tat specific factor 1. (676 aa)
TARDBPTAR DNA binding protein. (414 aa)
ESRP2Epithelial splicing regulatory protein 2. (716 aa)
POLDIP3DNA polymerase delta interacting protein 3. (430 aa)
RBM42RNA binding motif protein 42. (475 aa)
LARP4BLa ribonucleoprotein domain family member 4B. (742 aa)
G3U8W5_LOXAFUncharacterized protein. (277 aa)
SRSF6Serine and arginine rich splicing factor 6. (261 aa)
U2AF1L4Uncharacterized protein. (220 aa)
PTBP1Polypyrimidine tract binding protein 1. (547 aa)
RBM12BRNA binding motif protein 12B. (832 aa)
G3UC69_LOXAFRRM domain-containing protein. (163 aa)
G3UCF3_LOXAFRRM domain-containing protein. (172 aa)
G3UCI8_LOXAFUncharacterized protein. (301 aa)
RNPC3RNA binding region (RNP1, RRM) containing 3. (516 aa)
SRSF4Serine and arginine rich splicing factor 4. (505 aa)
G3UEJ5_LOXAFRRM domain-containing protein. (350 aa)
TRA2BTransformer 2 beta homolog. (276 aa)
RBM39RNA binding motif protein 39. (530 aa)
HNRNPA0Uncharacterized protein. (259 aa)
LOC100659162Peptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (301 aa)
NIFKNucleolar protein interacting with the FHA domain of MKI67. (318 aa)
SRSF9Serine and arginine rich splicing factor 9. (177 aa)
RBMS2RNA binding motif single stranded interacting protein 2. (399 aa)
SRSF7Serine and arginine rich splicing factor 7. (266 aa)
CPSF7Cleavage and polyadenylation specific factor 7. (471 aa)
EIF3BEukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family. (793 aa)
CELF3CUGBP Elav-like family member 3. (469 aa)
G3UIN6_LOXAFRRM domain-containing protein. (391 aa)
HNRNPA1Uncharacterized protein. (278 aa)
ENOX2Ecto-NOX disulfide-thiol exchanger 2. (601 aa)
SRSF1Uncharacterized protein. (248 aa)
G3UJR0_LOXAFRRM domain-containing protein. (248 aa)
CELF1CUGBP Elav-like family member 1. (516 aa)
SF3B6Splicing factor 3b subunit 6. (125 aa)
RAVER1Uncharacterized protein. (743 aa)
TRA2ATransformer 2 alpha homolog. (285 aa)
SNRNP70Small nuclear ribonucleoprotein U1 subunit 70. (252 aa)
CPSF6Cleavage and polyadenylation specific factor 6. (553 aa)
PPIL4Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. (493 aa)
G3UMB3_LOXAFRRM domain-containing protein. (279 aa)
G3U434_LOXAFRRM domain-containing protein. (152 aa)
PTBP2Polypyrimidine tract binding protein 2. (529 aa)
RBM43RNA binding motif protein 43. (353 aa)
SNRNP35Small nuclear ribonucleoprotein U11/U12 subunit 35. (246 aa)
RBM3RNA binding motif protein 3. (154 aa)
CPEB1Uncharacterized protein. (558 aa)
G3TLQ7_LOXAFRRM domain-containing protein. (148 aa)
RBPMS2RNA binding protein, mRNA processing factor 2. (180 aa)
CPEB3Cytoplasmic polyadenylation element binding protein 3. (714 aa)
G3TL85_LOXAFUncharacterized protein. (397 aa)
RBM23RNA binding motif protein 23. (447 aa)
TAF15TATA-box binding protein associated factor 15. (584 aa)
SRSF3Serine and arginine rich splicing factor 3. (164 aa)
SYNCRIPSynaptotagmin binding cytoplasmic RNA interacting protein. (620 aa)
DAZAP1DAZ associated protein 1. (406 aa)
U2AF2U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (475 aa)
SLTMSAFB like transcription modulator. (1031 aa)
ALKBH8AlkB homolog 8, tRNA methyltransferase. (633 aa)
RBMX2RNA binding motif protein X-linked 2. (330 aa)
MARF1Meiosis regulator and mRNA stability factor 1. (1744 aa)
RBMS1RNA binding motif single stranded interacting protein 1. (379 aa)
IGF2BP2Insulin like growth factor 2 mRNA binding protein 2. (520 aa)
GRSF1Uncharacterized protein. (484 aa)
HNRNPDHeterogeneous nuclear ribonucleoprotein D. (277 aa)
CPEB4Cytoplasmic polyadenylation element binding protein 4. (729 aa)
SFPQSplicing factor proline and glutamine rich. (704 aa)
SRSF11Serine and arginine rich splicing factor 11. (475 aa)
RBM33RNA binding motif protein 33. (1176 aa)
LARP7La ribonucleoprotein domain family member 7. (578 aa)
HNRNPH1Uncharacterized protein. (472 aa)
EWSR1EWS RNA binding protein 1. (663 aa)
RBM46RNA binding motif protein 46. (468 aa)
EIF4HEukaryotic translation initiation factor 4H. (246 aa)
PABPN1RRM domain-containing protein. (151 aa)
G3U4N4_LOXAFRRM domain-containing protein. (479 aa)
G3U4Z2_LOXAFUncharacterized protein. (351 aa)
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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