(5 nodes) High mobility group protein HMGA, and LMSTEN motif network (Equus caballus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HMGA1	High mobility group AT-hook 1. (107 aa)
	LIN28B	Lin-28 homolog B. (258 aa)
	HMGA2	Uncharacterized protein. (156 aa)
	IGF2BP2	Insulin like growth factor 2 mRNA binding protein 2. (1029 aa)
	MYBL1	MYB proto-oncogene like 1. (752 aa)

Your Current Organism:

Equus caballus

NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HMGA1	HMGA2	ENSECAP00000000464	ENSECAP00000039603	High mobility group AT-hook 1.	Uncharacterized protein.	0.731
HMGA1	IGF2BP2	ENSECAP00000000464	ENSECAP00000045670	High mobility group AT-hook 1.	Insulin like growth factor 2 mRNA binding protein 2.	0.504
HMGA1	MYBL1	ENSECAP00000000464	ENSECAP00000052932	High mobility group AT-hook 1.	MYB proto-oncogene like 1.	0.746
HMGA2	HMGA1	ENSECAP00000039603	ENSECAP00000000464	Uncharacterized protein.	High mobility group AT-hook 1.	0.731
HMGA2	IGF2BP2	ENSECAP00000039603	ENSECAP00000045670	Uncharacterized protein.	Insulin like growth factor 2 mRNA binding protein 2.	0.822
HMGA2	LIN28B	ENSECAP00000039603	ENSECAP00000039063	Uncharacterized protein.	Lin-28 homolog B.	0.654
IGF2BP2	HMGA1	ENSECAP00000045670	ENSECAP00000000464	Insulin like growth factor 2 mRNA binding protein 2.	High mobility group AT-hook 1.	0.504
IGF2BP2	HMGA2	ENSECAP00000045670	ENSECAP00000039603	Insulin like growth factor 2 mRNA binding protein 2.	Uncharacterized protein.	0.822
IGF2BP2	LIN28B	ENSECAP00000045670	ENSECAP00000039063	Insulin like growth factor 2 mRNA binding protein 2.	Lin-28 homolog B.	0.571
LIN28B	HMGA2	ENSECAP00000039063	ENSECAP00000039603	Lin-28 homolog B.	Uncharacterized protein.	0.654
LIN28B	IGF2BP2	ENSECAP00000039063	ENSECAP00000045670	Lin-28 homolog B.	Insulin like growth factor 2 mRNA binding protein 2.	0.571
MYBL1	HMGA1	ENSECAP00000052932	ENSECAP00000000464	MYB proto-oncogene like 1.	High mobility group AT-hook 1.	0.746