STRINGSTRING
PBRM1 PBRM1 SMARCB1 SMARCB1 SMARCA4 SMARCA4 DPF1 DPF1 ACTL6A ACTL6A ACTL6B ACTL6B ARID1A ARID1A SMARCE1 SMARCE1 BRD7 BRD7 ARID1B ARID1B SMARCD2 SMARCD2 ARID2 ARID2 SMARCC2 SMARCC2 DPF3 DPF3 SMARCD1 SMARCD1 PHF10 PHF10 CSPG5 CSPG5 SMARCA2 SMARCA2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PBRM1Polybromo 1. (1689 aa)
SMARCB1SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family. (385 aa)
SMARCA4SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4. (1647 aa)
DPF1Double PHD fingers 1. (398 aa)
ACTL6AActin like 6A; Belongs to the actin family. (429 aa)
ACTL6BActin like 6B; Belongs to the actin family. (426 aa)
ARID1AAT-rich interaction domain 1A. (2211 aa)
SMARCE1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1. (411 aa)
BRD7Bromodomain containing 7. (840 aa)
ARID1BAT-rich interaction domain 1B. (2351 aa)
SMARCD2SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2. (587 aa)
ARID2AT-rich interaction domain 2. (1874 aa)
SMARCC2SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2. (1244 aa)
DPF3Double PHD fingers 3. (519 aa)
SMARCD1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1. (552 aa)
PHF10PHD finger protein 10. (656 aa)
CSPG5SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1. (1681 aa)
SMARCA2SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2. (1563 aa)
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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