STRINGSTRING
POLR1A POLR1A POLR1B POLR1B POLR3F POLR3F GTF2A2 GTF2A2 WDR61 WDR61 GTF2H1 GTF2H1 CTR9 CTR9 GTF2H3 GTF2H3 CD3EAP CD3EAP POLR1E POLR1E CDC73 CDC73 PRIM1 PRIM1 POLR2C POLR2C ZNRD1 ZNRD1 POLR3E POLR3E TAF5L TAF5L POLR3D POLR3D LOC111768554 LOC111768554 ENSECAP00000026302 ENSECAP00000026302 GTF2F2 GTF2F2 ERCC3 ERCC3 ENSECAP00000028527 ENSECAP00000028527 TAF13 TAF13 POLR2E POLR2E SUPT3H SUPT3H POLR2J POLR2J RTF1 RTF1 LOC100060825 LOC100060825 TAF11 TAF11 TAF4B TAF4B RPAP1 RPAP1 GTF2E2 GTF2E2 RPRD2 RPRD2 RO60 RO60 POLR3A POLR3A CINP CINP PGM1 PGM1 TAF2 TAF2 WDR47 WDR47 TAF3 TAF3 GTF2E1 GTF2E1 PRIM2 PRIM2 PAF1 PAF1 GTF2H5 GTF2H5 TAF12 TAF12 GTF2A1L GTF2A1L POLR2I POLR2I POLA1 POLA1 POLR2B POLR2B TAF7L TAF7L TWISTNB TWISTNB LOC111772353 LOC111772353 POLR3H POLR3H POLR1A-2 POLR1A-2 GTF2H4 GTF2H4 LOC111772092 LOC111772092 GTF2F1 GTF2F1 POLR2D POLR2D POLR2L-2 POLR2L-2 SH3BP5L SH3BP5L CCNH CCNH GTF2A1 GTF2A1 F6RBM6_HORSE F6RBM6_HORSE POLI POLI POLR2H POLR2H TAF5 TAF5 TAF1 TAF1 TAF10 TAF10 RECQL5 RECQL5 LOC100073305 LOC100073305 ZNFX1 ZNFX1 LOC100630725 LOC100630725 POLR2L POLR2L LOC111771789 LOC111771789 ENSECAP00000046013 ENSECAP00000046013 POLR3GL POLR3GL POLR3C POLR3C MNAT1 MNAT1 POLR1C POLR1C PDCD1 PDCD1 TAF4 TAF4 C28H22orf23 C28H22orf23 PEX2 PEX2 POLR2G POLR2G POLR2K POLR2K POLR2A POLR2A DHX57 DHX57 POLR3G POLR3G POLR3K POLR3K TAF8 TAF8 RPRD1A RPRD1A TAF6 TAF6 LOC111771996 LOC111771996 RPAP2 RPAP2 TCEA1 TCEA1 ENSECAP00000031809 ENSECAP00000031809 PEPD PEPD TERT TERT POLA2 POLA2 RPRD1B RPRD1B POLRMT POLRMT CDK7 CDK7 LAP3 LAP3 ENSECAP00000037495 ENSECAP00000037495 LEO1 LEO1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
POLR1ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1720 aa)
POLR1BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1165 aa)
POLR3FDNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family. (316 aa)
GTF2A2General transcription factor IIA subunit 2. (140 aa)
WDR61WD repeat domain 61. (317 aa)
GTF2H1General transcription factor IIH subunit 1. (594 aa)
CTR9CTR9 homolog, Paf1/RNA polymerase II complex component. (1173 aa)
GTF2H3General transcription factor IIH subunit 3. (309 aa)
CD3EAPCD3e molecule associated protein. (542 aa)
POLR1ERNA polymerase I subunit E. (419 aa)
CDC73Cell division cycle 73. (531 aa)
PRIM1DNA primase; Belongs to the eukaryotic-type primase small subunit family. (420 aa)
POLR2CRNA polymerase II subunit C. (275 aa)
ZNRD1DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
POLR3ERNA polymerase III subunit E. (797 aa)
TAF5LTATA-box binding protein associated factor 5 like. (589 aa)
POLR3DUncharacterized protein. (398 aa)
LOC111768554Uncharacterized protein. (178 aa)
ENSECAP00000026302Uncharacterized protein. (1092 aa)
GTF2F2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (261 aa)
ERCC3ERCC excision repair 3, TFIIH core complex helicase subunit. (782 aa)
ENSECAP00000028527Uncharacterized protein. (118 aa)
TAF13TATA-box binding protein associated factor 13. (164 aa)
POLR2ERNA polymerase II subunit E. (210 aa)
SUPT3HSPT3 homolog, SAGA and STAGA complex component. (346 aa)
POLR2JRNA polymerase II subunit J. (117 aa)
RTF1RTF1 homolog, Paf1/RNA polymerase II complex component. (730 aa)
LOC100060825Uncharacterized protein. (253 aa)
TAF11TATA-box binding protein associated factor 11. (211 aa)
TAF4BTATA-box binding protein associated factor 4b. (869 aa)
RPAP1RNA polymerase II associated protein 1. (1393 aa)
GTF2E2General transcription factor IIE subunit 2. (337 aa)
RPRD2Regulation of nuclear pre-mRNA domain containing 2. (1462 aa)
RO60Ro60, Y RNA binding protein. (538 aa)
POLR3ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1359 aa)
CINPCyclin dependent kinase 2 interacting protein. (223 aa)
PGM1Phosphoglucomutase 1; Belongs to the phosphohexose mutase family. (580 aa)
TAF2TATA-box binding protein associated factor 2. (1260 aa)
WDR47WD repeat domain 47. (928 aa)
TAF3TATA-box binding protein associated factor 3. (928 aa)
GTF2E1General transcription factor IIE subunit 1. (524 aa)
PRIM2DNA primase large subunit; Regulatory subunit of the DNA primase complex and component of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which play an essential role in the initiation of DNA synthesis. The primase subunit of the polymerase alpha complex initiates DNA synthesis by oligomerising short RNA primers on both leading and lagging strands. (534 aa)
PAF1PAF1 homolog, Paf1/RNA polymerase II complex component. (582 aa)
GTF2H5General transcription factor IIH subunit 5. (71 aa)
TAF12TATA-box binding protein associated factor 12. (322 aa)
GTF2A1LUncharacterized protein. (473 aa)
POLR2IDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
POLA1DNA polymerase. (1469 aa)
POLR2BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
TAF7LTATA-box binding protein associated factor 7 like. (469 aa)
TWISTNBTWIST neighbor. (339 aa)
LOC111772353Uncharacterized protein. (458 aa)
POLR3HRNA polymerase III subunit H. (204 aa)
POLR1A-2RNA polymerase I subunit A. (1720 aa)
GTF2H4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (463 aa)
LOC111772092DNA-directed RNA polymerase II subunit GRINL1A-like. (458 aa)
GTF2F1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (557 aa)
POLR2DRNA polymerase II subunit D. (142 aa)
POLR2L-2RNA polymerase II subunit L. (79 aa)
SH3BP5LSH3 binding domain protein 5 like. (392 aa)
CCNHCyclin H; Belongs to the cyclin family. (323 aa)
GTF2A1General transcription factor IIA subunit 1. (376 aa)
F6RBM6_HORSETAFII28 domain-containing protein. (199 aa)
POLIDNA polymerase iota. (864 aa)
POLR2HDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
TAF5TATA-box binding protein associated factor 5. (800 aa)
TAF1Transcription initiation factor TFIID subunit. (1927 aa)
TAF10Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (218 aa)
RECQL5ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (990 aa)
LOC100073305General transcription factor IIH subunit. (395 aa)
ZNFX1Zinc finger NFX1-type containing 1. (1945 aa)
LOC100630725RNA polymerase II subunit M. (458 aa)
POLR2LRNA polymerase II subunit L. (67 aa)
LOC111771789DNA-directed RNA polymerase II subunit GRINL1A-like. (458 aa)
ENSECAP00000046013Uncharacterized protein. (79 aa)
POLR3GLDNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. (218 aa)
POLR3CRNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (534 aa)
MNAT1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (309 aa)
POLR1CRNA polymerase I and III subunit C. (346 aa)
PDCD1Programmed cell death 1. (287 aa)
TAF4TATA-box binding protein associated factor 4. (916 aa)
C28H22orf23Chromosome 28 C22orf23 homolog. (283 aa)
PEX2Peroxisomal biogenesis factor 2. (305 aa)
POLR2GRNA polymerase II subunit G. (172 aa)
POLR2KRNA polymerase II subunit K. (58 aa)
POLR2ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1970 aa)
DHX57DExH-box helicase 57. (1394 aa)
POLR3GDNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. (223 aa)
POLR3KDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (108 aa)
TAF8TATA-box binding protein associated factor 8. (310 aa)
RPRD1ARegulation of nuclear pre-mRNA domain containing 1A. (330 aa)
TAF6TATA-box binding protein associated factor 6. (765 aa)
LOC111771996DNA-directed RNA polymerase I subunit RPA1. (1720 aa)
RPAP2RNA polymerase II associated protein 2. (609 aa)
TCEA1Transcription elongation factor A1. (328 aa)
ENSECAP00000031809DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (108 aa)
PEPDPeptidase D. (493 aa)
TERTTelomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. Active in progenitor and cancer cells. Inactive, or very low activity, in normal somatic cells. Catalytic component of the teleromerase holoenzyme complex whose main activity is the elongation of telomeres by acting as a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. Catalyzes the RNA-dependent extension of 3'-chromosomal termini with the 6-nuc [...] (1226 aa)
POLA2DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (605 aa)
RPRD1BRegulation of nuclear pre-mRNA domain containing 1B. (326 aa)
POLRMTDNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. (1331 aa)
CDK7Cyclin dependent kinase 7. (380 aa)
LAP3Leucine aminopeptidase 3. (545 aa)
ENSECAP00000037495Uncharacterized protein. (395 aa)
LEO1LEO1 homolog, Paf1/RNA polymerase II complex component. (691 aa)
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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