(26 nodes) S100/CaBP-9k-type, calcium binding, subdomain network (Equus caballus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	S100A12	Protein S100; Belongs to the S-100 family. (114 aa)
	S100A8	Protein S100; Belongs to the S-100 family. (89 aa)
	S100B	Protein S100; Belongs to the S-100 family. (93 aa)
	TCHHL1	Trichohyalin like 1. (903 aa)
	ENSECAP00000040766	S_100 domain-containing protein. (94 aa)
	S100A7	Protein S100-A7; Belongs to the S-100 family. (204 aa)
	LOC100061631	EF-hand domain-containing protein; Belongs to the S-100 family. (160 aa)
	S100A16	Protein S100; Belongs to the S-100 family. (103 aa)
	S100Z	Protein S100; Belongs to the S-100 family. (102 aa)
	S100A2	S100 calcium binding protein A2. (223 aa)
	S100A3	S100 calcium binding protein A3. (173 aa)
	S100A4	Protein S100; Belongs to the S-100 family. (101 aa)
	S100A5	Protein S100; Belongs to the S-100 family. (91 aa)
	F6R2K0_HORSE	EF-hand domain-containing protein. (659 aa)
	CRNN	Cornulin. (480 aa)
	S100G	Protein S100-G; Belongs to the S-100 family. (79 aa)
	S100A11	Protein S100; Belongs to the S-100 family. (105 aa)
	S100A10	S100 calcium binding protein A10; Belongs to the S-100 family. (97 aa)
	S100A1	Protein S100; Belongs to the S-100 family. (94 aa)
	S100P	S100 calcium binding protein P. (95 aa)
	S100A13	S100 calcium binding protein A13; Belongs to the S-100 family. (98 aa)
	S100A14	S100 calcium binding protein A14; Belongs to the S-100 family. (104 aa)
	S100A9	EF-hand domain-containing protein; Belongs to the S-100 family. (153 aa)
	LOC100061598	EF-hand domain-containing protein; Belongs to the S-100 family. (162 aa)
	ENSECAP00000034011	S_100 domain-containing protein; Belongs to the S-100 family. (77 aa)
	S100A6	Protein S100-A6; May function as calcium sensor and modulator, contributing to cellular calcium signaling. May function by interacting with other proteins, such as TPR-containing proteins, and indirectly play a role in many physiological processes such as the reorganization of the actin cytoskeleton and in cell motility. Binds 2 calcium ions. Calcium binding is cooperative (By similarity). (92 aa)

Your Current Organism:

Equus caballus

NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CRNN	TCHHL1	ENSECAP00000015199	ENSECAP00000043041	Cornulin.	Trichohyalin like 1.	0.505
LOC100061598	LOC100061631	ENSECAP00000029371	ENSECAP00000043651	EF-hand domain-containing protein; Belongs to the S-100 family.	EF-hand domain-containing protein; Belongs to the S-100 family.	0.985
LOC100061598	S100A12	ENSECAP00000029371	ENSECAP00000007652	EF-hand domain-containing protein; Belongs to the S-100 family.	Protein S100; Belongs to the S-100 family.	0.700
LOC100061598	S100A8	ENSECAP00000029371	ENSECAP00000008446	EF-hand domain-containing protein; Belongs to the S-100 family.	Protein S100; Belongs to the S-100 family.	0.979
LOC100061598	S100Z	ENSECAP00000029371	ENSECAP00000000997	EF-hand domain-containing protein; Belongs to the S-100 family.	Protein S100; Belongs to the S-100 family.	0.451
LOC100061631	LOC100061598	ENSECAP00000043651	ENSECAP00000029371	EF-hand domain-containing protein; Belongs to the S-100 family.	EF-hand domain-containing protein; Belongs to the S-100 family.	0.985
LOC100061631	S100A11	ENSECAP00000043651	ENSECAP00000016586	EF-hand domain-containing protein; Belongs to the S-100 family.	Protein S100; Belongs to the S-100 family.	0.440
LOC100061631	S100A12	ENSECAP00000043651	ENSECAP00000007652	EF-hand domain-containing protein; Belongs to the S-100 family.	Protein S100; Belongs to the S-100 family.	0.948
LOC100061631	S100A16	ENSECAP00000043651	ENSECAP00000000463	EF-hand domain-containing protein; Belongs to the S-100 family.	Protein S100; Belongs to the S-100 family.	0.420
LOC100061631	S100A4	ENSECAP00000043651	ENSECAP00000006194	EF-hand domain-containing protein; Belongs to the S-100 family.	Protein S100; Belongs to the S-100 family.	0.419
LOC100061631	S100A8	ENSECAP00000043651	ENSECAP00000008446	EF-hand domain-containing protein; Belongs to the S-100 family.	Protein S100; Belongs to the S-100 family.	0.949
LOC100061631	S100A9	ENSECAP00000043651	ENSECAP00000025158	EF-hand domain-containing protein; Belongs to the S-100 family.	EF-hand domain-containing protein; Belongs to the S-100 family.	0.944
LOC100061631	S100P	ENSECAP00000043651	ENSECAP00000021450	EF-hand domain-containing protein; Belongs to the S-100 family.	S100 calcium binding protein P.	0.430
LOC100061631	S100Z	ENSECAP00000043651	ENSECAP00000000997	EF-hand domain-containing protein; Belongs to the S-100 family.	Protein S100; Belongs to the S-100 family.	0.419
S100A1	S100A12	ENSECAP00000020449	ENSECAP00000007652	Protein S100; Belongs to the S-100 family.	Protein S100; Belongs to the S-100 family.	0.408
S100A1	S100A16	ENSECAP00000020449	ENSECAP00000000463	Protein S100; Belongs to the S-100 family.	Protein S100; Belongs to the S-100 family.	0.505
S100A1	S100A2	ENSECAP00000020449	ENSECAP00000004869	Protein S100; Belongs to the S-100 family.	S100 calcium binding protein A2.	0.588
S100A1	S100A3	ENSECAP00000020449	ENSECAP00000006176	Protein S100; Belongs to the S-100 family.	S100 calcium binding protein A3.	0.404
S100A1	S100A4	ENSECAP00000020449	ENSECAP00000006194	Protein S100; Belongs to the S-100 family.	Protein S100; Belongs to the S-100 family.	0.632
S100A1	S100B	ENSECAP00000020449	ENSECAP00000010116	Protein S100; Belongs to the S-100 family.	Protein S100; Belongs to the S-100 family.	0.764