STRINGSTRING
IBSP IBSP MYOD1 MYOD1 TGM2 TGM2 EGR2 EGR2 NANOG NANOG CNN1 CNN1 MYOG MYOG CCN2 CCN2 HPRT1 HPRT1 LUM LUM TNMD TNMD SP7 SP7 DCN DCN COL15A1 COL15A1 THBS2 THBS2 GAPDH GAPDH SIX1 SIX1 PLOD1 PLOD1 CD19 CD19 COL3A1 COL3A1 CD34 CD34 COL6A1 COL6A1 FMOD FMOD CD44 CD44 TP53 TP53 COMP COMP SPARC SPARC ACAN ACAN LPL LPL ALB ALB BGN BGN EYA1 EYA1 COL2A1 COL2A1 COL5A1 COL5A1 TGFB2 TGFB2 COL1A1 COL1A1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
IBSPIntegrin binding sialoprotein. (310 aa)
MYOD1Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation. (319 aa)
TGM2Transglutaminase 2. (687 aa)
EGR2Early growth response 2. (486 aa)
NANOGHomeobox domain-containing protein. (310 aa)
CNN1Calponin; Thin filament-associated protein that is implicated in the regulation and modulation of smooth muscle contraction. It is capable of binding to actin, calmodulin, troponin C and tropomyosin. The interaction of calponin with actin inhibits the actomyosin Mg-ATPase activity. (375 aa)
MYOGMyogenin. (224 aa)
CCN2Cellular communication network factor 2. (475 aa)
HPRT1Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family. (224 aa)
LUMLumican. (341 aa)
TNMDTenomodulin. (317 aa)
SP7Sp7 transcription factor. (431 aa)
DCNDecorin; May affect the rate of fibrils formation; Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily. (360 aa)
COL15A1Collagen type XV alpha 1 chain. (1388 aa)
THBS2Thrombospondin 2. (1172 aa)
GAPDHGlyceraldehyde-3-phosphate dehydrogenase. (333 aa)
SIX1SIX homeobox 1. (284 aa)
PLOD1Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1. (727 aa)
CD19CD19 molecule. (559 aa)
COL3A1Collagen type III alpha 1 chain. (1466 aa)
CD34CD34 molecule. (379 aa)
COL6A1Collagen type VI alpha 1 chain. (1027 aa)
FMODFibromodulin. (392 aa)
CD44CD44 antigen. (700 aa)
TP53Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression. Its pro-apoptotic activity is activated via its intera [...] (381 aa)
COMPCartilage oligomeric matrix protein. (793 aa)
SPARCSecreted protein acidic and cysteine rich. (313 aa)
ACANAggrecan. (2703 aa)
LPLLipoprotein lipase; Key enzyme in triglyceride metabolism. Catalyzes the hydrolysis of triglycerides from circulating chylomicrons and very low density lipoproteins (VLDL), and thereby plays an important role in lipid clearance from the blood stream, lipid utilization and storage. Mediates margination of triglyceride-rich lipoprotein particles in capillaries. Recruited to its site of action on the luminal surface of vascular endothelium by binding to GPIHBP1 and cell surface heparan sulfate proteoglycans. (471 aa)
ALBSerum albumin; Serum albumin, the main protein of plasma, has a good binding capacity for water, Ca(2+), Na(+), K(+), fatty acids, hormones, bilirubin and drugs. Its main function is the regulation of the colloidal osmotic pressure of blood. Major zinc transporter in plasma, typically binds about 80% of all plasma zinc (By similarity). Major calcium and magnesium transporter in plasma, binds approximately 45% of circulating calcium and magnesium in plasma (By similarity). Potentially has more than two calcium-binding sites and might additionally bind calcium in a non-specific manner (B [...] (620 aa)
BGNBiglycan; May be involved in collagen fiber assembly; Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily. (460 aa)
EYA1Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (621 aa)
COL2A1Collagen type II alpha 1 chain. (1487 aa)
COL5A1Collagen type V alpha 1 chain. (1813 aa)
TGFB2Transforming growth factor beta; Belongs to the TGF-beta family. (442 aa)
COL1A1Collagen type I alpha 1 chain. (1521 aa)
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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