STRINGSTRING
COL16A1 COL16A1 COL24A1 COL24A1 THBS2 THBS2 THBS4 THBS4 COL12A1 COL12A1 COL18A1 COL18A1 THBS3 THBS3 COL21A1 COL21A1 COL14A1 COL14A1 THBS1 THBS1 COL19A1 COL19A1 COL20A1 COL20A1 COL27A1 COL27A1 COL9A1 COL9A1 COL11A2 COL11A2 COL11A1 COL11A1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
COL16A1Collagen type XVI alpha 1 chain. (1612 aa)
COL24A1Collagen type XXIV alpha 1 chain. (1709 aa)
THBS2Thrombospondin 2. (1172 aa)
THBS4Thrombospondin 4. (961 aa)
COL12A1Collagen type XII alpha 1 chain. (3120 aa)
COL18A1Collagen type XVIII alpha 1 chain. (1752 aa)
THBS3Thrombospondin 3. (956 aa)
COL21A1Collagen type XXI alpha 1 chain. (967 aa)
COL14A1Collagen type XIV alpha 1 chain. (1796 aa)
THBS1Thrombospondin 1. (1170 aa)
COL19A1Collagen type XIX alpha 1 chain. (1133 aa)
COL20A1Collagen type XX alpha 1 chain. (1320 aa)
COL27A1Collagen type XXVII alpha 1 chain. (1840 aa)
COL9A1Collagen type IX alpha 1 chain. (919 aa)
COL11A2Collagen type XI alpha 2 chain. (1736 aa)
COL11A1Collagen type XI alpha 1 chain. (1818 aa)
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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