(48 nodes) Ubiquitin homologues network (Equus caballus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ELOB	Elongin B. (118 aa)
	SUMO3	Small ubiquitin-related modifier. (104 aa)
	TMUB1	Transmembrane and ubiquitin like domain containing 1. (246 aa)
	UBA52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	UBLCP1	Ubiquitin like domain containing CTD phosphatase 1. (318 aa)
	RPS27A	Ribosomal protein S27a. (156 aa)
	BAG1	BCL2 associated athanogene 1. (208 aa)
	OASL	Uncharacterized protein. (514 aa)
	UBL7	Ubiquitin like 7. (380 aa)
	UHRF2	Ubiquitin like with PHD and ring finger domains 2. (835 aa)
	BAG6	BCL2 associated athanogene 6. (1073 aa)
	UBL4A	Ubiquitin like 4A. (159 aa)
	LOC100147283	Uncharacterized protein. (515 aa)
	LOC100052508	Uncharacterized protein. (520 aa)
	HERPUD1	Homocysteine inducible ER protein with ubiquitin like domain 1. (392 aa)
	UBTD1	Ubiquitin domain containing 1. (227 aa)
	MIDN	Midnolin. (459 aa)
	ZFAND4	Zinc finger AN1-type containing 4. (740 aa)
	F7BVE8_HORSE	Ubiquitin-like domain-containing protein. (72 aa)
	F6V625_HORSE	Ubiquitin-like domain-containing protein. (93 aa)
	DDI1	DNA damage inducible 1 homolog 1. (400 aa)
	UBC	Ubiquitin B. (305 aa)
	UBQLN3	Ubiquilin 3. (658 aa)
	LOC100049890	Small ubiquitin-related modifier. (95 aa)
	ISG15	ISG15 ubiquitin like modifier. (164 aa)
	SUMO2	Small ubiquitin like modifier 2. (95 aa)
	ENSECAP00000029507	Uncharacterized protein. (319 aa)
	LOC111772206	Uncharacterized protein. (408 aa)
	ANKUB1	Ankyrin repeat and ubiquitin domain containing 1. (565 aa)
	UBC-2	Ubiquitin-related; [Ubiquitin]: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be involved in DNA repa [...] (305 aa)
	NEDD8	NEDD8 ubiquitin like modifier. (81 aa)
	UBFD1	Ubiquitin family domain containing 1. (363 aa)
	UBD	Ubiquitin D. (171 aa)
	UBQLN4	Ubiquilin 4. (615 aa)
	HERPUD2	HERPUD family member 2. (405 aa)
	ENSECAP00000043854	Ubiquitin-like domain-containing protein. (92 aa)
	ENSECAP00000044533	Ubiquitin-like domain-containing protein. (180 aa)
	RAD23B	RAD23 homolog B, nucleotide excision repair protein. (408 aa)
	NFATC2IP	Nuclear factor of activated T cells 2 interacting protein. (415 aa)
	GKAP1	Ubiquilin 1. (875 aa)
	PRKN	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (466 aa)
	TMUB2	Transmembrane and ubiquitin like domain containing 2. (342 aa)
	FAU	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (133 aa)
	LOC111767493	RAD23 homolog B, nucleotide excision repair protein. (408 aa)
	USP14	Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. (554 aa)
	SF3A1	Splicing factor 3a subunit 1. (793 aa)
	RAD23A	RAD23 homolog A, nucleotide excision repair protein. (363 aa)
	SUMO1	Small ubiquitin like modifier 1. (284 aa)

Your Current Organism:

Equus caballus

NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BAG6	ENSECAP00000043854	ENSECAP00000011963	ENSECAP00000043854	BCL2 associated athanogene 6.	Ubiquitin-like domain-containing protein.	0.587
BAG6	F6V625_HORSE	ENSECAP00000011963	ENSECAP00000004962	BCL2 associated athanogene 6.	Ubiquitin-like domain-containing protein.	0.426
BAG6	F7BVE8_HORSE	ENSECAP00000011963	ENSECAP00000005326	BCL2 associated athanogene 6.	Ubiquitin-like domain-containing protein.	0.459
BAG6	FAU	ENSECAP00000011963	ENSECAP00000019440	BCL2 associated athanogene 6.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.459
BAG6	ISG15	ENSECAP00000011963	ENSECAP00000000924	BCL2 associated athanogene 6.	ISG15 ubiquitin like modifier.	0.426
BAG6	LOC100052508	ENSECAP00000011963	ENSECAP00000009972	BCL2 associated athanogene 6.	Uncharacterized protein.	0.429
BAG6	OASL	ENSECAP00000011963	ENSECAP00000012270	BCL2 associated athanogene 6.	Uncharacterized protein.	0.426
BAG6	UBC	ENSECAP00000011963	ENSECAP00000002343	BCL2 associated athanogene 6.	Ubiquitin B.	0.426
BAG6	UBC-2	ENSECAP00000011963	ENSECAP00000035675	BCL2 associated athanogene 6.	Ubiquitin-related; [Ubiquitin]: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be involved in DNA repa [...]	0.432
BAG6	UBD	ENSECAP00000011963	ENSECAP00000041044	BCL2 associated athanogene 6.	Ubiquitin D.	0.426
BAG6	UBL4A	ENSECAP00000011963	ENSECAP00000011241	BCL2 associated athanogene 6.	Ubiquitin like 4A.	0.872
BAG6	UBL7	ENSECAP00000011963	ENSECAP00000012094	BCL2 associated athanogene 6.	Ubiquitin like 7.	0.544
BAG6	UBQLN4	ENSECAP00000011963	ENSECAP00000043308	BCL2 associated athanogene 6.	Ubiquilin 4.	0.621
BAG6	ZFAND4	ENSECAP00000011963	ENSECAP00000005825	BCL2 associated athanogene 6.	Zinc finger AN1-type containing 4.	0.430
DDI1	ENSECAP00000029507	ENSECAP00000003849	ENSECAP00000029507	DNA damage inducible 1 homolog 1.	Uncharacterized protein.	0.481
DDI1	GKAP1	ENSECAP00000003849	ENSECAP00000052041	DNA damage inducible 1 homolog 1.	Ubiquilin 1.	0.491
DDI1	LOC111767493	ENSECAP00000003849	ENSECAP00000019588	DNA damage inducible 1 homolog 1.	RAD23 homolog B, nucleotide excision repair protein.	0.481
DDI1	LOC111772206	ENSECAP00000003849	ENSECAP00000032588	DNA damage inducible 1 homolog 1.	Uncharacterized protein.	0.481
DDI1	RAD23A	ENSECAP00000003849	ENSECAP00000022146	DNA damage inducible 1 homolog 1.	RAD23 homolog A, nucleotide excision repair protein.	0.707
DDI1	RAD23B	ENSECAP00000003849	ENSECAP00000045632	DNA damage inducible 1 homolog 1.	RAD23 homolog B, nucleotide excision repair protein.	0.481