STRINGSTRING
MFFC18_13850 MFFC18_13850 MFFC18_45730 MFFC18_45730 MFFC18_45720 MFFC18_45720 MFFC18_45710 MFFC18_45710 MFFC18_42970 MFFC18_42970 MFFC18_04570 MFFC18_04570 smc_5 smc_5 MFFC18_15100 MFFC18_15100 MFFC18_15090 MFFC18_15090 MFFC18_15080 MFFC18_15080 MFFC18_17560 MFFC18_17560 MFFC18_17790 MFFC18_17790 MFFC18_19710 MFFC18_19710 MFFC18_29600 MFFC18_29600 MFFC18_29590 MFFC18_29590 MFFC18_48510 MFFC18_48510
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
MFFC18_13850Unannotated protein. (666 aa)
MFFC18_45730Unannotated protein. (464 aa)
MFFC18_45720Unannotated protein. (745 aa)
MFFC18_45710Unannotated protein. (929 aa)
MFFC18_42970Unannotated protein. (1927 aa)
MFFC18_04570Unannotated protein. (687 aa)
smc_5Unannotated protein. (777 aa)
MFFC18_15100Unannotated protein. (872 aa)
MFFC18_15090Unannotated protein. (785 aa)
MFFC18_15080Unannotated protein. (438 aa)
MFFC18_17560Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily. (188 aa)
MFFC18_17790Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily. (187 aa)
MFFC18_19710Unannotated protein. (1009 aa)
MFFC18_29600Unannotated protein. (441 aa)
MFFC18_29590Unannotated protein. (800 aa)
MFFC18_48510Unannotated protein. (1272 aa)
Your Current Organism:
Mariniblastus fucicola
NCBI taxonomy Id: 980251
Other names: DSM 26290, LMG 29748, LMG:29748, M. fucicola, Mariniblastus fucicola Lage et al. 2017, Planctomyces sp. FC18, Planctomycetaceae bacterium FC18, strain FC18
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