STRINGSTRING
copA_1 copA_1 MFFC18_02700 MFFC18_02700 yccM_1 yccM_1 ccoP ccoP MFFC18_02650 MFFC18_02650
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
copA_1Unannotated protein. (834 aa)
MFFC18_02700Unannotated protein. (263 aa)
yccM_1Unannotated protein. (469 aa)
ccoPUnannotated protein. (204 aa)
MFFC18_02650Unannotated protein; Belongs to the heme-copper respiratory oxidase family. (936 aa)
Your Current Organism:
Mariniblastus fucicola
NCBI taxonomy Id: 980251
Other names: DSM 26290, LMG 29748, LMG:29748, M. fucicola, Mariniblastus fucicola Lage et al. 2017, Planctomyces sp. FC18, Planctomycetaceae bacterium FC18, strain FC18
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