STRINGSTRING
galE_3 galE_3 wbpI wbpI MFFC18_22180 MFFC18_22180 capD capD epsN_1 epsN_1 glmM glmM rfbE rfbE gmuF gmuF gfo_4 gfo_4 gtaB gtaB rmlD rmlD lnpD lnpD glmU_1 glmU_1 manC manC pseI pseI MFFC18_01280 MFFC18_01280 fcl fcl tuaD tuaD gmd gmd MFFC18_01330 MFFC18_01330 rffG_1 rffG_1 rmlA rmlA wecB wecB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
galE_3Unannotated protein; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (336 aa)
wbpIUnannotated protein; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (380 aa)
MFFC18_22180Unannotated protein. (381 aa)
capDUnannotated protein. (349 aa)
epsN_1Unannotated protein; Belongs to the DegT/DnrJ/EryC1 family. (386 aa)
glmMUnannotated protein. (453 aa)
rfbEUnannotated protein. (360 aa)
gmuFUnannotated protein. (329 aa)
gfo_4Unannotated protein. (359 aa)
gtaBUnannotated protein. (281 aa)
rmlDUnannotated protein. (329 aa)
lnpDUnannotated protein; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (340 aa)
glmU_1Unannotated protein. (249 aa)
manCUnannotated protein. (358 aa)
pseIUnannotated protein. (348 aa)
MFFC18_01280Unannotated protein. (336 aa)
fclUnannotated protein; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. (342 aa)
tuaDUnannotated protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (466 aa)
gmdUnannotated protein; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. (336 aa)
MFFC18_01330Unannotated protein. (330 aa)
rffG_1Unannotated protein; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. (366 aa)
rmlAUnannotated protein; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. (286 aa)
wecBUnannotated protein; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (378 aa)
Your Current Organism:
Mariniblastus fucicola
NCBI taxonomy Id: 980251
Other names: DSM 26290, LMG 29748, LMG:29748, M. fucicola, Mariniblastus fucicola Lage et al. 2017, Planctomyces sp. FC18, Planctomycetaceae bacterium FC18, strain FC18
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