Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| acn | gcvP | GCA_001642875_02165 | GCA_001642875_00278 | Unannotated protein; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.428 |
| acn | gltA2 | GCA_001642875_02165 | GCA_001642875_00563 | Unannotated protein; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | Unannotated protein; Belongs to the citrate synthase family. | 0.987 |
| acn | mdh | GCA_001642875_02165 | GCA_001642875_01121 | Unannotated protein; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | Unannotated protein; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.535 |
| acn | nqo1 | GCA_001642875_02165 | GCA_001642875_00465 | Unannotated protein; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | Unannotated protein. | 0.710 |
| acn | thlA | GCA_001642875_02165 | GCA_001642875_01850 | Unannotated protein; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family. | 0.440 |
| acsA | acs_2 | GCA_001642875_03204 | GCA_001642875_00490 | Unannotated protein; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | Unannotated protein. | 0.928 |
| acsA | gltA2 | GCA_001642875_03204 | GCA_001642875_00563 | Unannotated protein; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | Unannotated protein; Belongs to the citrate synthase family. | 0.967 |
| acsA | thlA | GCA_001642875_03204 | GCA_001642875_01850 | Unannotated protein; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family. | 0.957 |
| acs_2 | acsA | GCA_001642875_00490 | GCA_001642875_03204 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.928 |
| acs_2 | gltA2 | GCA_001642875_00490 | GCA_001642875_00563 | Unannotated protein. | Unannotated protein; Belongs to the citrate synthase family. | 0.967 |
| acs_2 | thlA | GCA_001642875_00490 | GCA_001642875_01850 | Unannotated protein. | Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family. | 0.962 |
| eda | hprA | GCA_001642875_01642 | GCA_001642875_03462 | Unannotated protein. | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.909 |
| gcvH_1 | gcvH_2 | GCA_001642875_02363 | GCA_001642875_00277 | Unannotated protein. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.922 |
| gcvH_1 | gcvP | GCA_001642875_02363 | GCA_001642875_00278 | Unannotated protein. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.999 |
| gcvH_1 | gcvT_1 | GCA_001642875_02363 | GCA_001642875_03369 | Unannotated protein. | Unannotated protein; Belongs to the GcvT family. | 0.997 |
| gcvH_1 | gcvT_2 | GCA_001642875_02363 | GCA_001642875_00276 | Unannotated protein. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.997 |
| gcvH_1 | glnA | GCA_001642875_02363 | GCA_001642875_02869 | Unannotated protein. | Unannotated protein. | 0.811 |
| gcvH_1 | glnII | GCA_001642875_02363 | GCA_001642875_03048 | Unannotated protein. | Unannotated protein. | 0.811 |
| gcvH_1 | glyA | GCA_001642875_02363 | GCA_001642875_03733 | Unannotated protein. | Unannotated protein; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.957 |
| gcvH_1 | lpd | GCA_001642875_02363 | GCA_001642875_03241 | Unannotated protein. | Unannotated protein. | 0.956 |
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