6 items (Morus notabilis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	L484_005527	Uncharacterized protein. (129 aa)
	L484_025659	Uncharacterized protein. (121 aa)
	L484_004899	Uncharacterized protein. (319 aa)
	L484_014583	Uncharacterized protein. (124 aa)
	L484_016203	Jacalin-type lectin domain-containing protein. (331 aa)
	L484_000399	Acyl-CoA-binding domain-containing protein 2. (62 aa)

Your Current Organism:

Morus notabilis

NCBI taxonomy Id: 981085
Other names: M. notabilis, Morus notabilis C.K.Schneid.

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
L484_000399	L484_004899	W9SED4	W9RE63	Acyl-CoA-binding domain-containing protein 2.	Uncharacterized protein.	0.449
L484_000399	L484_005527	W9SED4	W9R0S7	Acyl-CoA-binding domain-containing protein 2.	Uncharacterized protein.	0.418
L484_000399	L484_014583	W9SED4	W9RRJ2	Acyl-CoA-binding domain-containing protein 2.	Uncharacterized protein.	0.535
L484_000399	L484_016203	W9SED4	W9RWV0	Acyl-CoA-binding domain-containing protein 2.	Jacalin-type lectin domain-containing protein.	0.459
L484_000399	L484_025659	W9SED4	W9R8Z5	Acyl-CoA-binding domain-containing protein 2.	Uncharacterized protein.	0.510
L484_004899	L484_000399	W9RE63	W9SED4	Uncharacterized protein.	Acyl-CoA-binding domain-containing protein 2.	0.449
L484_004899	L484_005527	W9RE63	W9R0S7	Uncharacterized protein.	Uncharacterized protein.	0.514
L484_004899	L484_014583	W9RE63	W9RRJ2	Uncharacterized protein.	Uncharacterized protein.	0.464
L484_004899	L484_016203	W9RE63	W9RWV0	Uncharacterized protein.	Jacalin-type lectin domain-containing protein.	0.520
L484_004899	L484_025659	W9RE63	W9R8Z5	Uncharacterized protein.	Uncharacterized protein.	0.446
L484_005527	L484_000399	W9R0S7	W9SED4	Uncharacterized protein.	Acyl-CoA-binding domain-containing protein 2.	0.418
L484_005527	L484_004899	W9R0S7	W9RE63	Uncharacterized protein.	Uncharacterized protein.	0.514
L484_005527	L484_014583	W9R0S7	W9RRJ2	Uncharacterized protein.	Uncharacterized protein.	0.489
L484_005527	L484_016203	W9R0S7	W9RWV0	Uncharacterized protein.	Jacalin-type lectin domain-containing protein.	0.514
L484_005527	L484_025659	W9R0S7	W9R8Z5	Uncharacterized protein.	Uncharacterized protein.	0.467
L484_014583	L484_000399	W9RRJ2	W9SED4	Uncharacterized protein.	Acyl-CoA-binding domain-containing protein 2.	0.535
L484_014583	L484_004899	W9RRJ2	W9RE63	Uncharacterized protein.	Uncharacterized protein.	0.464
L484_014583	L484_005527	W9RRJ2	W9R0S7	Uncharacterized protein.	Uncharacterized protein.	0.489
L484_014583	L484_016203	W9RRJ2	W9RWV0	Uncharacterized protein.	Jacalin-type lectin domain-containing protein.	0.486
L484_014583	L484_025659	W9RRJ2	W9R8Z5	Uncharacterized protein.	Uncharacterized protein.	0.523