5 items (Morus notabilis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	L484_022651	Uncharacterized protein. (98 aa)
	L484_025443	Uncharacterized protein. (61 aa)
	L484_001062	Uncharacterized protein. (203 aa)
	L484_014354	Expansin-like A1; Belongs to the expansin family. (261 aa)
	L484_016205	Jacalin-type lectin domain-containing protein. (150 aa)

Your Current Organism:

Morus notabilis

NCBI taxonomy Id: 981085
Other names: M. notabilis, Morus notabilis C.K.Schneid.

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
L484_001062	L484_014354	W9R5X8	W9RTP1	Uncharacterized protein.	Expansin-like A1; Belongs to the expansin family.	0.470
L484_001062	L484_016205	W9R5X8	W9SLC1	Uncharacterized protein.	Jacalin-type lectin domain-containing protein.	0.519
L484_001062	L484_022651	W9R5X8	W9QXK4	Uncharacterized protein.	Uncharacterized protein.	0.429
L484_001062	L484_025443	W9R5X8	W9R2K6	Uncharacterized protein.	Uncharacterized protein.	0.547
L484_014354	L484_001062	W9RTP1	W9R5X8	Expansin-like A1; Belongs to the expansin family.	Uncharacterized protein.	0.470
L484_014354	L484_016205	W9RTP1	W9SLC1	Expansin-like A1; Belongs to the expansin family.	Jacalin-type lectin domain-containing protein.	0.478
L484_014354	L484_025443	W9RTP1	W9R2K6	Expansin-like A1; Belongs to the expansin family.	Uncharacterized protein.	0.478
L484_016205	L484_001062	W9SLC1	W9R5X8	Jacalin-type lectin domain-containing protein.	Uncharacterized protein.	0.519
L484_016205	L484_014354	W9SLC1	W9RTP1	Jacalin-type lectin domain-containing protein.	Expansin-like A1; Belongs to the expansin family.	0.478
L484_016205	L484_022651	W9SLC1	W9QXK4	Jacalin-type lectin domain-containing protein.	Uncharacterized protein.	0.466
L484_016205	L484_025443	W9SLC1	W9R2K6	Jacalin-type lectin domain-containing protein.	Uncharacterized protein.	0.542
L484_022651	L484_001062	W9QXK4	W9R5X8	Uncharacterized protein.	Uncharacterized protein.	0.429
L484_022651	L484_016205	W9QXK4	W9SLC1	Uncharacterized protein.	Jacalin-type lectin domain-containing protein.	0.466
L484_022651	L484_025443	W9QXK4	W9R2K6	Uncharacterized protein.	Uncharacterized protein.	0.477
L484_025443	L484_001062	W9R2K6	W9R5X8	Uncharacterized protein.	Uncharacterized protein.	0.547
L484_025443	L484_014354	W9R2K6	W9RTP1	Uncharacterized protein.	Expansin-like A1; Belongs to the expansin family.	0.478
L484_025443	L484_016205	W9R2K6	W9SLC1	Uncharacterized protein.	Jacalin-type lectin domain-containing protein.	0.542
L484_025443	L484_022651	W9R2K6	W9QXK4	Uncharacterized protein.	Uncharacterized protein.	0.477