(5 nodes) Mitochondrial small ribosomal subunit, and Ribosomal protein S14, conserved site network (Morus notabilis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	L484_003307	Uncharacterized protein. (440 aa)
	L484_025882	30S ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family. (502 aa)
	L484_009617	Uncharacterized protein. (278 aa)
	L484_018650	30S ribosomal protein S12-B. (158 aa)
	L484_016795	Ribosomal protein S14. (107 aa)

Your Current Organism:

Morus notabilis

NCBI taxonomy Id: 981085
Other names: M. notabilis, Morus notabilis C.K.Schneid.

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
L484_003307	L484_009617	W9QX62	W9RTR0	Uncharacterized protein.	Uncharacterized protein.	0.992
L484_003307	L484_016795	W9QX62	W9SCF6	Uncharacterized protein.	Ribosomal protein S14.	0.999
L484_003307	L484_018650	W9QX62	W9RZ68	Uncharacterized protein.	30S ribosomal protein S12-B.	0.996
L484_003307	L484_025882	W9QX62	W9R2K0	Uncharacterized protein.	30S ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	0.999
L484_009617	L484_003307	W9RTR0	W9QX62	Uncharacterized protein.	Uncharacterized protein.	0.992
L484_009617	L484_016795	W9RTR0	W9SCF6	Uncharacterized protein.	Ribosomal protein S14.	0.997
L484_009617	L484_018650	W9RTR0	W9RZ68	Uncharacterized protein.	30S ribosomal protein S12-B.	0.995
L484_009617	L484_025882	W9RTR0	W9R2K0	Uncharacterized protein.	30S ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	0.994
L484_016795	L484_003307	W9SCF6	W9QX62	Ribosomal protein S14.	Uncharacterized protein.	0.999
L484_016795	L484_009617	W9SCF6	W9RTR0	Ribosomal protein S14.	Uncharacterized protein.	0.997
L484_016795	L484_018650	W9SCF6	W9RZ68	Ribosomal protein S14.	30S ribosomal protein S12-B.	0.999
L484_016795	L484_025882	W9SCF6	W9R2K0	Ribosomal protein S14.	30S ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	0.999
L484_018650	L484_003307	W9RZ68	W9QX62	30S ribosomal protein S12-B.	Uncharacterized protein.	0.996
L484_018650	L484_009617	W9RZ68	W9RTR0	30S ribosomal protein S12-B.	Uncharacterized protein.	0.995
L484_018650	L484_016795	W9RZ68	W9SCF6	30S ribosomal protein S12-B.	Ribosomal protein S14.	0.999
L484_018650	L484_025882	W9RZ68	W9R2K0	30S ribosomal protein S12-B.	30S ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	0.997
L484_025882	L484_003307	W9R2K0	W9QX62	30S ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	Uncharacterized protein.	0.999
L484_025882	L484_009617	W9R2K0	W9RTR0	30S ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	Uncharacterized protein.	0.994
L484_025882	L484_016795	W9R2K0	W9SCF6	30S ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	Ribosomal protein S14.	0.999
L484_025882	L484_018650	W9R2K0	W9RZ68	30S ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	30S ribosomal protein S12-B.	0.997