(59 nodes) Mixed, incl. Amine metabolic process, and FMO oxidises nucleophiles network (Procavia capensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSPCAP00000000130	annotation not available (385 aa)
	KYAT3	Kynurenine aminotransferase 3. (454 aa)
	HAAO	3-hydroxyanthranilate 3,4-dioxygenase. (268 aa)
	KMO	Kynurenine 3-monooxygenase. (485 aa)
	LPO	Lactoperoxidase. (712 aa)
	IL4I1	Interleukin 4 induced 1. (565 aa)
	ENSPCAP00000003112	annotation not available (452 aa)
	QDPR	Quinoid dihydropteridine reductase. (209 aa)
	FMO3	Flavin containing dimethylaniline monoxygenase 3. (531 aa)
	ENSPCAP00000003749	annotation not available (277 aa)
	MOXD1	Monooxygenase DBH like 1. (521 aa)
	IDO2	Indoleamine 2,3-dioxygenase 2. (404 aa)
	DDI2	DNA damage inducible 1 homolog 2. (395 aa)
	RSC1A1	Regulator of solute carriers 1. (610 aa)
	ENSPCAP00000004502	annotation not available (535 aa)
	PAH	Phenylalanine hydroxylase. (451 aa)
	PCBD2	Pterin-4 alpha-carbinolamine dehydratase 2. (129 aa)
	DDC	Dopa decarboxylase. (413 aa)
	MAOA	Monoamine oxidase A. (526 aa)
	ENSPCAP00000006293	annotation not available (272 aa)
	PCBD1	Pterin-4 alpha-carbinolamine dehydratase 1. (104 aa)
	TYR	Tyrosinase. (530 aa)
	ENSPCAP00000006896	annotation not available (513 aa)
	NNMT	Nicotinamide N-methyltransferase. (208 aa)
	EEF2K	Eukaryotic elongation factor 2 kinase. (724 aa)
	CDO1	Cysteine dioxygenase type 1. (149 aa)
	HNMT	Histamine N-methyltransferase. (292 aa)
	AOC3	Amine oxidase copper containing 3. (762 aa)
	AOC2	Amine oxidase copper containing 2. (754 aa)
	MAOB	Monoamine oxidase B. (502 aa)
	NCEH1	Neutral cholesterol ester hydrolase 1. (437 aa)
	SMOX	Spermine oxidase. (424 aa)
	AADAT	Aminoadipate aminotransferase. (425 aa)
	ENSPCAP00000008837	annotation not available (210 aa)
	ENSPCAP00000009399	annotation not available (475 aa)
	DBH	Dopamine beta-hydroxylase. (620 aa)
	ENSPCAP00000009718	annotation not available (505 aa)
	FMO1	Flavin containing dimethylaniline monoxygenase 1. (532 aa)
	ENSPCAP00000010241	annotation not available (444 aa)
	TPH1	Tryptophan hydroxylase 1. (331 aa)
	AOC1	Amine oxidase copper containing 1. (749 aa)
	ENSPCAP00000010998	annotation not available (327 aa)
	DDI1	DNA damage inducible 1 homolog 1. (404 aa)
	ENSPCAP00000011548	annotation not available (415 aa)
	TPH2	Tryptophan hydroxylase 2. (476 aa)
	TH	Tyrosine hydroxylase. (527 aa)
	IDO1	Indoleamine 2,3-dioxygenase 1. (388 aa)
	PNMT	Phenylethanolamine N-methyltransferase. (282 aa)
	HDC	Histidine decarboxylase. (647 aa)
	FMO4	Flavin containing dimethylaniline monoxygenase 4. (555 aa)
	ENSPCAP00000013749	annotation not available (200 aa)
	FMO5	Flavin containing dimethylaniline monoxygenase 5. (487 aa)
	ENSPCAP00000013824	annotation not available (400 aa)
	ENSPCAP00000014541	annotation not available (362 aa)
	FMO2	Flavin containing dimethylaniline monoxygenase 2. (471 aa)
	KYNU	Kynureninase. (367 aa)
	ENSPCAP00000015450	annotation not available (917 aa)
	ENSPCAP00000015518	annotation not available (178 aa)
	ENSPCAP00000015701	annotation not available (204 aa)

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AADAT	DDC	ENSPCAP00000008682	ENSPCAP00000005545	Aminoadipate aminotransferase.	Dopa decarboxylase.	0.766
AADAT	ENSPCAP00000003112	ENSPCAP00000008682	ENSPCAP00000003112	Aminoadipate aminotransferase.	annotation not available	0.675
AADAT	ENSPCAP00000003749	ENSPCAP00000008682	ENSPCAP00000003749	Aminoadipate aminotransferase.	annotation not available	0.534
AADAT	ENSPCAP00000009718	ENSPCAP00000008682	ENSPCAP00000009718	Aminoadipate aminotransferase.	annotation not available	0.533
AADAT	ENSPCAP00000010998	ENSPCAP00000008682	ENSPCAP00000010998	Aminoadipate aminotransferase.	annotation not available	0.602
AADAT	ENSPCAP00000011548	ENSPCAP00000008682	ENSPCAP00000011548	Aminoadipate aminotransferase.	annotation not available	0.940
AADAT	ENSPCAP00000013749	ENSPCAP00000008682	ENSPCAP00000013749	Aminoadipate aminotransferase.	annotation not available	0.534
AADAT	ENSPCAP00000013824	ENSPCAP00000008682	ENSPCAP00000013824	Aminoadipate aminotransferase.	annotation not available	0.534
AADAT	ENSPCAP00000015518	ENSPCAP00000008682	ENSPCAP00000015518	Aminoadipate aminotransferase.	annotation not available	0.926
AADAT	HAAO	ENSPCAP00000008682	ENSPCAP00000002177	Aminoadipate aminotransferase.	3-hydroxyanthranilate 3,4-dioxygenase.	0.541
AADAT	HDC	ENSPCAP00000008682	ENSPCAP00000013333	Aminoadipate aminotransferase.	Histidine decarboxylase.	0.766
AADAT	IDO1	ENSPCAP00000008682	ENSPCAP00000012507	Aminoadipate aminotransferase.	Indoleamine 2,3-dioxygenase 1.	0.755
AADAT	IDO2	ENSPCAP00000008682	ENSPCAP00000003962	Aminoadipate aminotransferase.	Indoleamine 2,3-dioxygenase 2.	0.754
AADAT	KMO	ENSPCAP00000008682	ENSPCAP00000002465	Aminoadipate aminotransferase.	Kynurenine 3-monooxygenase.	0.952
AADAT	KYAT3	ENSPCAP00000008682	ENSPCAP00000000426	Aminoadipate aminotransferase.	Kynurenine aminotransferase 3.	0.940
AADAT	KYNU	ENSPCAP00000008682	ENSPCAP00000015138	Aminoadipate aminotransferase.	Kynureninase.	0.948
AADAT	MAOA	ENSPCAP00000008682	ENSPCAP00000006176	Aminoadipate aminotransferase.	Monoamine oxidase A.	0.715
AADAT	MAOB	ENSPCAP00000008682	ENSPCAP00000007974	Aminoadipate aminotransferase.	Monoamine oxidase B.	0.715
AADAT	NCEH1	ENSPCAP00000008682	ENSPCAP00000008119	Aminoadipate aminotransferase.	Neutral cholesterol ester hydrolase 1.	0.534
AOC1	DDC	ENSPCAP00000010687	ENSPCAP00000005545	Amine oxidase copper containing 1.	Dopa decarboxylase.	0.919